| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2228 |
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| Symbol | |
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| ID | 3964832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2831722 |
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| End bp | 2832726 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921319 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_527700 |
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| Protein GI | 90021873 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00325884 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAACA AGCGCATTTT GACGGGTATT ACTACTACAG GCACACCTCA TTTAGGTAAT
TATGTGGGGG CAATTCGCCC AGCCATTGAG GCAAGTCGTA AGGGCGATGC TGAAACATTC
TTCTTTTTGG CGGACATGCA TGCATTAATT AAATGCCAAG AGCCTGAAAA GGTGCGGCAG
TCCTCGAAGG AGATAGCTGC TACTTGGTTG GCGTTGGGGT TAGATACCAA CACTTCCACA
TTTTATCGTC AGTCTGATGT GCCAGAAATT ACCGAGCTCT GCTGGGTGCT TAATTGCATG
GCCGCTAAGG GGTTAATGAA CCGCGCACAT GCCTATAAAG CTGCCGTGGC TCAAAACCTA
GAAAACGGCG AAGACCCAGA TTTTGCCGTA ACCATGGGTT TATACAGCTA CCCGGTATTG
ATGGCTGCCG ATATTTTAAT GTTTAACGCC AGTCATGTGC CCGTAGGTAA AGATCAAATT
CAGCATGTTG AAATGGCGCG TGACATAGCT GGTAGATTTA ATCATCACTT TGATTCTTTA
TTTACGCTAC CAGAAGCGGT AGTGGAAGAT TCAGTAGCTG TTTTGCAAGG CTTAGATGGC
CGCAAAATGA GCAAAAGCTA CAACAACACC ATCCCGTTGT TTTTGCCAGA GAAGCAACTT
AAAAAACACA TTAATAAAAT TAAAACTAAT TTGCTTGAGC CGGGTGAACC TAAAGACCCA
GATGATTCTA CGGTATTCCA AATTTGGAAA GCGTTCGCAA CACCAGAGCA AACTGAGGCT
ATGCGCAAAG AGTTTGAAAA TGGCATTGCT TGGGGCGAAG CGAAAAAGCA GTTGTTTGAG
CTTGTAAATG GCGAAGTGAG TGAGGCAAGG GAAAAATATA ATGCGTTGCT AGAAGATGTG
CCTGCTATCG AAAAAGTGAT GAAGTTGGGC GCTGAAAAAG CCCGCGATTA CAGCGCGCCT
TTATTGGCTA AAGTACGTAA AGCCGTGGGT ATTGGCGGTT TTTAA
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| Protein sequence | MTNKRILTGI TTTGTPHLGN YVGAIRPAIE ASRKGDAETF FFLADMHALI KCQEPEKVRQ
SSKEIAATWL ALGLDTNTST FYRQSDVPEI TELCWVLNCM AAKGLMNRAH AYKAAVAQNL
ENGEDPDFAV TMGLYSYPVL MAADILMFNA SHVPVGKDQI QHVEMARDIA GRFNHHFDSL
FTLPEAVVED SVAVLQGLDG RKMSKSYNNT IPLFLPEKQL KKHINKIKTN LLEPGEPKDP
DDSTVFQIWK AFATPEQTEA MRKEFENGIA WGEAKKQLFE LVNGEVSEAR EKYNALLEDV
PAIEKVMKLG AEKARDYSAP LLAKVRKAVG IGGF
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