| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2222 |
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| Symbol | |
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| ID | 3965460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2823373 |
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| End bp | 2824110 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921312 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_527694 |
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| Protein GI | 90021867 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAC ACAACTACGC ACCTTCTCGC ATGAACCTTT TACTATTAGA CAATGCCGAA
AATGATTCTC GAGCTGTGGT TACTGGCGAG AGGCACCAAC ATATTCGCAA GGTATTAAAG
CTTCAACAGG GCGACACCCT TCGGGTGGGC ATTATTAATG GCCCAGTTGG AATAGCAACC
GTTGCCGAGC AGAGCGATAC GTCTACCACT TTACAGTTAA GTATTAATTC ACCTGCCTCA
CCACCTTTGC CATTAACACT TATTCTAGCC CTGCCCCGTC CGCAAATGAT TAAACGCATA
TTGCAAACCA TTGCGACTAT GGGGGTACAC GAATTACACC TAATTCAAAC AGGAAAAGTA
GAAAAAAGCT TTTGGCAATC GCCCGCTGTT ACCGATCAAG CCATTCGCGA GCAGTTGACT
CTTGGGCTTG AACAAGGTGT AGCTACGCAT CTACCCACAG TGCATAAACA TATGCGTTTT
CGGCCATTCG CTGAAGATGT ACTGCCTTCC ATAACGCCTA CCAATAAAAA ATTGATAGCG
CATCTAGGCG ACTACCCCAG CTGCCCTAGT TTGCAACCTA AAGAAGCCTG CACCATGGTT
ATTGGGCCAG AAGGTGGCTT TACTGAGCGT GAAGTAGAGA ATTTTGTGAA CAACGGCTAC
CAACCGGTAC AGCTTGGGGC GCGAGTATTG AAAGTAGAAA CAGCAGTGCC AGTAATTATT
AGCAAGCTCT ACTACTAA
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| Protein sequence | MQAHNYAPSR MNLLLLDNAE NDSRAVVTGE RHQHIRKVLK LQQGDTLRVG IINGPVGIAT
VAEQSDTSTT LQLSINSPAS PPLPLTLILA LPRPQMIKRI LQTIATMGVH ELHLIQTGKV
EKSFWQSPAV TDQAIREQLT LGLEQGVATH LPTVHKHMRF RPFAEDVLPS ITPTNKKLIA
HLGDYPSCPS LQPKEACTMV IGPEGGFTER EVENFVNNGY QPVQLGARVL KVETAVPVII
SKLYY
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