Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2220 |
Symbol | |
ID | 3965458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2821191 |
End bp | 2821877 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921310 |
Product | hypothetical protein |
Protein accession | YP_527692 |
Protein GI | 90021865 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.556627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGT ACTCCGTTAT CATTCCAATT TTAAATGAAA GGGCAAAGCT GCCGAATTTA TGTGAAGCGC TATCACAGCT TACAGTGTGC GCAGCTGTAG AGTTTTTATT TGTAGATGGT GGAAGCGAAG ATGGTAGCGT TGTATGGCTT AAACAAAATA ATTTTACTGT AATTACCGCA CAAAAAGGGC GAGCTTACCA AATGAACGCT GGCGCGAAGT TGGCGCAAGG CGAGTGGTTG ATATTCTTAC ACGCAGATAC GTCTATGCCT GCCACCTTTT TTACGGCATT GGCCGCTCAG CCAAGTCATG TTGCATGGGG GCACGCGCGG GTAAAACTGG ATGATAATAC GCATATTGCT CGTTGGGTAG AGCGAGGCAT TGCTTTTAGA ACGGCCATTA GTGGTGTGGC AACGGGTGAT CAAACCCTTT TTGTAAGGCG TAATATTTTT AACGCGATGG GCGGTTATGA GCCTATTTTA TTAATGGAGG ATGTGGCCTT AAGCTGCAAA CTTAATCGAT ACTACGATAA AGCTATTTTG CCGGTAGAAG TCGTTACGTC TAGTAGAAAG TGGCGTAAAA ATGGGTACAT AAAAACCATT ATATTAATGT GGTGTATACA ATTGGCCTAC GTGTGCGGGG TATCTACAAA TCGATTGCAT CGATGGTATT ACGGGGGCCG CTTATGA
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Protein sequence | MPLYSVIIPI LNERAKLPNL CEALSQLTVC AAVEFLFVDG GSEDGSVVWL KQNNFTVITA QKGRAYQMNA GAKLAQGEWL IFLHADTSMP ATFFTALAAQ PSHVAWGHAR VKLDDNTHIA RWVERGIAFR TAISGVATGD QTLFVRRNIF NAMGGYEPIL LMEDVALSCK LNRYYDKAIL PVEVVTSSRK WRKNGYIKTI ILMWCIQLAY VCGVSTNRLH RWYYGGRL
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