Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2216 |
Symbol | |
ID | 3965454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2818634 |
End bp | 2819365 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921306 |
Product | flagellar basal body P-ring biosynthesis protein-like |
Protein accession | YP_527688 |
Protein GI | 90021861 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGGA ATCGTAGTTT TTTACTTGTA TTTATTTCAC TTACTCTTTT AGTGGCAAAC AAAGCAGCGA GCGCCGAAAT TGAGTACATG ACTACGCAAG AGCTACGTCA ACAAATTGAC CTTTTTGCGC GAAATCACTT CTCTGGGGTG TATACCGACA AAATTTTGGA CAAGGATTTA AAAATCGACG TTGGCAACCT AGATAGCCGG TTACGCCTCG CCCGCTGCGG CCACCCCTTA GAGATGAATG TAAACACGCC ATCACATATG ACCGCCAACG CGACAATTAA AACCACCTGT GCCGGCCCAC ACCGCTGGTC CATTTATGTA CCAGTTGATA TAGAAGTTTA TAGCGAGATA GTGGTTGCTT CGCGCACCCT AAGACGCGGC GCTACAATTA GCGAAGCCGA CTTAAACGTA CAGGTTATTA ATATCGCCAG ATACGGCTCT GGCCATGTGC AAGATGCGCA GCGCATTATT GGTCAAGAGC TTACCCGCTC CGTTAACGCT GGCGAGGCAA TTAAACTCTC TCATGTTCGA CCCGCGCAGG TTGTGAGTAA AGGCGATACA GTGGTAATTG AAGTACGAGG TAATATGATA GCCGTAGCGG TAAATGGCGA GGCCCTCGAA AACGGCCACG TTGGCAAACA AATTCGCGTG CGCAACAATC AATCCAAGCG CGTTGTAGAT GGCGTGGTAA GCGGCCCAGG GCGAGTAAGC ATTAGCATTT AG
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Protein sequence | MMRNRSFLLV FISLTLLVAN KAASAEIEYM TTQELRQQID LFARNHFSGV YTDKILDKDL KIDVGNLDSR LRLARCGHPL EMNVNTPSHM TANATIKTTC AGPHRWSIYV PVDIEVYSEI VVASRTLRRG ATISEADLNV QVINIARYGS GHVQDAQRII GQELTRSVNA GEAIKLSHVR PAQVVSKGDT VVIEVRGNMI AVAVNGEALE NGHVGKQIRV RNNQSKRVVD GVVSGPGRVS ISI
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