Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2215 |
Symbol | |
ID | 3965453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2817531 |
End bp | 2818481 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921305 |
Product | putative chemotaxis protein |
Protein accession | YP_527687 |
Protein GI | 90021860 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTG TTCTGGATAG TGTTAATCAG CGAACCCAAC TGGTGGGGCA AAACAGATTA GAGCTTCTGC TTTTTAATCT AGGCGACAAC CAAACCTATG GCATCAATGT GTTCAAGGTG AAGGAAGTGC TGCAGTGTCC GCCGTTAAAC GAAATACCTA AGCGCAACCC CGTTGTGCGG GGTGTTGCTC ATATACGTGG CGGCACCATT CCTATTATGG ATTTACGCAG AGCAACCGGC AGCGCGCCGC TAACAAACCT AGAAACCTGT TTTGTGATAA TCACAGAATA TAATCGCTCT ACACAGGGCT TTTTGGTTAA GGGTGTTGAG CGCATCGTAA ATATGAATTG GGGTGATATT CATCCGCCAC CCAAAGGGGC GGGCAGAGAG AATTACCTTA CTGCGGTTAC CCAAGTAGAT AATCGCTTGG TAGAAATAAT AGATGTAGAA AAGATACTTG CTGAAGTTTC CCCAATGTTG GATGAGGTAA GCGCAGAGGT TATTCAAGAT GCGCAGGCCG AAACAACGGT ACTTAAGCAC GTGTTAGTTG CTGATGATTC TGCGATCGCT CGCAAGCAAA TTCAAAGAGT TCTGGCATCA CTGGGTATAA AAACTACCGT GTGTAAAGAT GGAGCTGAAG CGCTTGGGTA TTTAACGGAC TTAGTCGCTG AAGGTAAAGA CCCCTATCAT GAACTAATGA TGGTAATTTC CGATATTGAA ATGCCAGAGA TGGACGGTTA TACCTTTACT GCAGAGGTGC GGGCTAATCC AAAACTCGCA AACATGCACA TTATTTTACA CACGTCTTTA AGTGGTGTGT TTAATGAAGC TATGGTTAAA AAAGTGGGTG CCAACGATTT CTTAGCGAAA TTTCATCCGG ACGAACTGGC TAAGCGTGTT AACGCAAGAA TTAAAGTTCT AACTGGTGAC GGCTTTGAGA TGGAAGACTA G
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Protein sequence | MAGVLDSVNQ RTQLVGQNRL ELLLFNLGDN QTYGINVFKV KEVLQCPPLN EIPKRNPVVR GVAHIRGGTI PIMDLRRATG SAPLTNLETC FVIITEYNRS TQGFLVKGVE RIVNMNWGDI HPPPKGAGRE NYLTAVTQVD NRLVEIIDVE KILAEVSPML DEVSAEVIQD AQAETTVLKH VLVADDSAIA RKQIQRVLAS LGIKTTVCKD GAEALGYLTD LVAEGKDPYH ELMMVISDIE MPEMDGYTFT AEVRANPKLA NMHIILHTSL SGVFNEAMVK KVGANDFLAK FHPDELAKRV NARIKVLTGD GFEMED
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