Gene Sde_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2214 
Symbol 
ID3965452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2816612 
End bp2817469 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content42% 
IMG OID637921304 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_527686 
Protein GI90021859 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCT CAGTATCAGG AATGGAAAGT GGCGCAGCGC TGGATGCCGA AGCATTTGAG 
GCATTTAGAA TTTTTTTGCA GGAAGCTGCA GGAATTGACT TAGGTAGTAA TAAGCAGTAC
TTGGTGGCTA CGCGTATTCG ACGTATTTTA ATTGATTACA AGCTAGACTC ACTCATTGAG
CTAGTGCTAA CCATTAAACA GCCTAGTCAG CGTGAATTAC GCCAAAAGGT TATCGATGCA
ATGACCACAA ACGAGACTTT TTGGTTTCGT GATATTTACC CTTACGATTA CCTGCAAAGT
ACCTTGCTGC CCGAATGGTT TAAAAATAAG CCCAATGGGC GCATGCGCAT TTGGTCATCT
GCTTGTTCTT CAGGGCAGGA GCCATATTCT ATTAGCATAG TTCTAGAAGA GTTTAGTAAG
CGCAACTTTG GCAAACGTAT TAATGCCGAA ATTGTTGCCA CCGACCTTTC TACCGAGATT
ATGGCGCAGG CGAAAAGTGC AGAGTACGAT AGACTATCCG TTTCACGGGG GCTATCGTCC
GAGAGATTAA GGGAAAACTT TGAAGAAATT GAAAAGGAAA AATGGCGTGT AAAGCCAAGC
ATAAAAAGCA GAATTACTTT TAGACCCCAA AACCTAAAAG ACTCCTACGT TATGCTTGGA
AAGTTCGATA TTGTTTTTTG TCGGAATGTA CTAATTTATT TTTCTAGTGA ATTAAAGCAA
GACATCATTA AGCGTATACA CGCCACAATG GTCCCTGGCG GCTATTTATT CTTAGGCTCT
TCAGAAAGCC TAGGCGAATC TGCAAAGCTA TTTGACATGG TTCACTGTAG CCCTGGAGTG
GTGTATAGAG CTAAATAG
 
Protein sequence
MVTSVSGMES GAALDAEAFE AFRIFLQEAA GIDLGSNKQY LVATRIRRIL IDYKLDSLIE 
LVLTIKQPSQ RELRQKVIDA MTTNETFWFR DIYPYDYLQS TLLPEWFKNK PNGRMRIWSS
ACSSGQEPYS ISIVLEEFSK RNFGKRINAE IVATDLSTEI MAQAKSAEYD RLSVSRGLSS
ERLRENFEEI EKEKWRVKPS IKSRITFRPQ NLKDSYVMLG KFDIVFCRNV LIYFSSELKQ
DIIKRIHATM VPGGYLFLGS SESLGESAKL FDMVHCSPGV VYRAK