Gene Sde_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2213 
Symbol 
ID3965451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2815895 
End bp2816299 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content47% 
IMG OID637921303 
ProductGTP-binding protein LepA 
Protein accessionYP_527685 
Protein GI90021858 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTT CATTTGATAA AGCACTGGGA ATTTACGAAT CCGCGCTTTC TCTACGTTCT 
GAGCGTGCTG GCGTGTTGGC GAATAACCTC GCAAACGTGA ATACCCCCGG ATATAAAGCG
CGCGATATCG ATTTTCAGCA AGCATTGAAA GATTCAATGG GACAGGGAAT AGGCGGCAAA
GCGGCTAAAA CTACCCACGC GGCGCACTTT GGAGCGGCAG AAAATAACCG CTTTAGCGGT
GAACCTTTGT ACCGTTCTCC CTCGCAGCCC TCTGTAGACG GCAATACCGT TGAAGAACAA
AAAGAGCATG CGGAATACAT GAAAAACACA TTGGAGTTTC AAGCGGCGTT TACTGTACTT
AACAGTAAAT TCAAAGGCTT AACTAAAGCG ATACGCGGCG AATAA
 
Protein sequence
MAISFDKALG IYESALSLRS ERAGVLANNL ANVNTPGYKA RDIDFQQALK DSMGQGIGGK 
AAKTTHAAHF GAAENNRFSG EPLYRSPSQP SVDGNTVEEQ KEHAEYMKNT LEFQAAFTVL
NSKFKGLTKA IRGE