| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2194 |
|---|
| Symbol | |
|---|
| ID | 3965964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2790554 |
|---|
| End bp | 2791993 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637921284 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_527666 |
|---|
| Protein GI | 90021839 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGTG ACAAAAAAAT ACTCATTGTC GAAGACGACG CGACTCGATT ACACGATTTA
GTGGTGATAA TCGACTTTTT AGGGGAGAGC CCCATACAAA CGGCGTTTTC GAGCTGGCAA
GATATTGCCG CTCAGGCCGC TGACGACGAA GTCGGCATGA TTATTCTTGG CAATACCCAC
GGCGGGGAAA CGTTAAAACA ACATTTAGAG GGTATAAAAA ACACTTACGA GTTAAAGCCT
GTTGCCGTAG TAGGCGAATA TGGCGATATA AACCCCGAAT GGGACCCGTA CCTGCGCCAT
ATGGCCATTG GTACCCTAGA GCTGCCAATT ACCTACAATG CCTTAATAGA TGCCATGCAT
AGGGCGCAGC GATTGAACGT CGCGAGGGAT GCCGCGCGCG GGGGCTTGGC ATCTAGACCA
ACCCATCTGT TCCGCAGTCT GGTGGGCACC AGTCGCGAGG AGCAAACGGT AAGGACAATG
ATGGATCAGG TTGCCGATAC CGATGTAACT GTACTTATTC AGGGCGAATC GGGTACGGGC
AAAGAAGTTG TGGCACGCAA CCTTCACTAT AATTCCCCGC GTAGAGACAA GCCATTTGTG
CCTGTTAACT GCGGTGCTAT TCCGGCAGAG CTGCTAGAGA GTGAGTTGTT TGGGCATGAG
AAAGGCGCGT TTACAGGGGC TATTAACGCG CGAGCGGGGC GTTTTGAACT CGCTGAAGGC
GGCACATTAT TTTTAGATGA AATTGGCGAT ATGCCACTGC ACATGCAAGT AAAAATATTG
CGTGTACTGC AAGAGAAATC CTACGAGCGA GTAGGGGGTA ACAAATCGTA CCCCACCGAT
GTGCGCATTA TTGCCGCTAC CCACCGCGAT TTAGATGTAA TGATTGCAGA TGGAAGCTTT
CGCGAAGATT TATACTACCG TTTAAATGTG TTTCCCATAG AAATGCCACC ATTGCGCGAG
CGCGCAGAAG ATATTCCGCT ACTTATAAAC GAGTTAGTAA ATCGCTTAGA AAGCGAACAC
CGTGGCTCCA TACGCTTTAA CTCTGCGGCA ATTCTATCTT TGTGTCGCCA CCCTTGGCCG
GGTAATGTAA GAGAGCTGGC CAACTTGGTG GAACGCATGG CTATTATGCA ACCTTATGGC
GTTGTGGGTG TGCAAGATTT ACCTGCTAAG TATCGTCATG TAGAGCTTGA AGATGATGAC
CCGCTAGATG ACCTAGAAAG CATGCCAGTT AAAACGACCA TGGTTGGTGC GGGTGACGTG
ACCTTGTTGC CCGATGGTGG AATAGATTTA AAGGAATATA TAACCGGCTT AGAGCAAAGT
TTAATTCAGC AAGCGCTAGA TGATTGTGGC GGTGTGGTGG CGAGAGCGGC CGATAGGCTT
ACAATTCGTC GAACCACTTT GGTGGAGAAA ATGCGTAAAT ACGGGTTGCA GCGCAGCTAG
|
|---|
| Protein sequence | MLGDKKILIV EDDATRLHDL VVIIDFLGES PIQTAFSSWQ DIAAQAADDE VGMIILGNTH
GGETLKQHLE GIKNTYELKP VAVVGEYGDI NPEWDPYLRH MAIGTLELPI TYNALIDAMH
RAQRLNVARD AARGGLASRP THLFRSLVGT SREEQTVRTM MDQVADTDVT VLIQGESGTG
KEVVARNLHY NSPRRDKPFV PVNCGAIPAE LLESELFGHE KGAFTGAINA RAGRFELAEG
GTLFLDEIGD MPLHMQVKIL RVLQEKSYER VGGNKSYPTD VRIIAATHRD LDVMIADGSF
REDLYYRLNV FPIEMPPLRE RAEDIPLLIN ELVNRLESEH RGSIRFNSAA ILSLCRHPWP
GNVRELANLV ERMAIMQPYG VVGVQDLPAK YRHVELEDDD PLDDLESMPV KTTMVGAGDV
TLLPDGGIDL KEYITGLEQS LIQQALDDCG GVVARAADRL TIRRTTLVEK MRKYGLQRS
|
|---|
| |