| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2174 |
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| Symbol | |
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| ID | 3967558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2767963 |
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| End bp | 2768370 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921264 |
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| Product | surface presentation of antigens (SpoA) protein |
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| Protein accession | YP_527646 |
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| Protein GI | 90021819 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGATG AAGACGAGAA TGTAGACCAA GATAGTATGG CGGACGAATG GGCCGCCGCC
ATGGAGCAGC AAGAAACTGA AGACGGTGCT GCACAGTCTA TTGATCTTGA TGAGTTTCAA
CCAGTAACGG GTGCGCCTAC AAATAACAAT CCAGATTTAG ACGTTATTTT AGATATCCCT
GTTTCCATAT CCATGGAGGT GGGTAGAACA TCAATTACTA TTCGCAACTT ACTTCAGCTT
AACCAAGGCT CTGTTATCGA GCTAGACAGG CTGGCCGGTG AGCCATTGGA TGTGCTCGTA
AATGGCACGC TTATCGCGCA CGGCGAGGTG GTTGTAGTGA ACGAAAAATT TGGTATACGC
ATGACGGATG TAATTAGCCC GTCCGAGCGA ATTAAAAAAC TGCGTTAA
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| Protein sequence | MSDEDENVDQ DSMADEWAAA MEQQETEDGA AQSIDLDEFQ PVTGAPTNNN PDLDVILDIP
VSISMEVGRT SITIRNLLQL NQGSVIELDR LAGEPLDVLV NGTLIAHGEV VVVNEKFGIR
MTDVISPSER IKKLR
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