Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2167 |
Symbol | flhA |
ID | 3967551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2760513 |
End bp | 2762780 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921257 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_527639 |
Protein GI | 90021812 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAC CTTTTTACGA CCATCTAAAA TCCTTACCCG GTACGATTAC CGGCAAATCC ACCTTAGATG GCATTCGCGG TGCTGGTAGA GGTAACTTAA GCGTACCTAT TTTGTTGTTA ATGCTACTCG GCATGATGAC ATTACCCTTG CCGGCATTTC TGTTAGATGC ATTCTTCTCG TTTAATATCG CTCTCTCAAT TGTGGTGCTA CTGGTTGCTG TTTATAGCTT GCGCCCCCTT GATTTTGCTG TGTTTCCTAC TATTTTGCTC ATCGCCACGC TCTTGCGATT AGCCCTAAAC GTGGCCTCTA CACGGGTTGT GCTTTTAGAA GGGCATCAAG GGGGCGATGC TGCAGGCAAA GTTATTCAGG CCTTTGGTGA AGTGGTAATT GGTGGTAACT ACGCTGTGGG TTTGGTTGTA TTTATCATAT TAATTATTAT TAACTTTGTT GTGGTTACCA AAGGTGCGGG GCGTATTTCG GAAGTAAGCG CACGATTTAC CTTGGATGCA ATGCCCGGCA AACAAATGGC AATTGATGCC GATTTAAATG CAGGCATTAT TGATCAAGAT GAAGCCCGGA CACGCCGAGA AGACGTGGCA TCCGAAGCGG ATTTTTACGG AGCGATGGAT GGTGCCAGCA AATTTGTACG CGGTGACTCC GTCGCCGGTA TTTTAATTCT AATAATTAAT ATTTGCGGCG GTTTGCTAGT AGGCATGGTG CAACATCAGC TTGAATTTAG TGACGCCTTA GAAAAATATG TTTTGCTAAC GATTGGTGAT GGTCTGGTAG CTCAAATTCC ATCGCTTTTA TTATCGGTAG CCGCAGCTAT TATGGTTACG CGAGTAAACT CTTCAGAAGA TATGAACCGT CAAGTTCTAT CTCAAATGTT TGAGTCCCCT AAAGCATTGG CTGTTGCCGG CTGTATTATA TTTATTATGG GTGCCATTCC TGGCATGCCT CATTTCCCCT TTATTACCCT TGCAATTATT TGCGGTATTT TGGCGTATTA CATTCATTTT CGCTCCCAAG AAGCGGAAGT GGTGGAGGTC GGCAATGCGC GCGGCTTCAC GCAGTCATCA CCGAGTGGCC AAACGGGTGC GCAACCGTCT ATGCCCGCTG GTAATATGCC AGCAATAGAA AACCAAAGCG CACGCCAAGG CAACCCGCCA CCACAAAGTA GCGAGCCAAC AGAAGTAAGT TGGGATGATG TAACGCCGGT AGATCTTGTG GGGTTAGAAG TGGGCTACCG TTTAATTCCT TTGGTGGACA AAGGGCAGGG CGGTGAATTA TTGGGCCGTA TCAAGGGTGT ACGTAAAAAA CTATCGCAAG ATTTGGGCTT CCTAATACCT GCAGTGCATA TTCGCGATAA CTTAGACCTG CTACCCAGTG GCTACCGTAT AACGCTTATG GGTGTGAGTA TTGGTGAAGG CGAAGTATTC CCCGACAAAT TTTTGGCGAT AAACCCCGGG CAAGTGTTTG GTAGCTTGCA GGGTACCAAA ACAAAAGACC CAGCATTTGG CTTAGAAGCA ATTTGGATAG ACGAGGCGCA GCGCGAGCAA GCGCAAACTC TAGGGTATAC CGTTGTTGAC CCGAGCACAG TGGTGGCCAC GCACTTAAAC CAAATAATAC AAACGCACAC ACACGAATTA TTGGGGCATG AAGAAGTACA AAAATGGTTG GATTTACTCG GTGAAAAATC GCCTAAATTG GTTGAAGAGC TAGTGCCAGA GACACTTTCA ATCAATCAGC TCTTAAAAAC GCTGCAAGGT TTACTGCGCG AGCAAGTCCC CATTCGCGAC ATGCGCACTA TTGCCGAGGC GTTGGCAGCG CACGGCAATA AATCGATGGA TACCACTGCT TTAACGTCAA TTGCGCGCGT TTCACTTGCG CGACAAATTG TGCAAAACAT TGTGGGGCAA GATCCAAACT TACCGGTTAT TACTTTAGAT CCGTCATTGG AACAGTTGTT GCTACAGTCT GTACAACAGG CACAAAAAGC TGGCGCTAGC GACGGAGCGT TTATCGAACC GCAGCTTGCA GAAAGGCTAA ATAAGTCACT TGTTGAAACA GCGAAAAAGC AAGAAATGGC CGGCCGCCCA ATAGTACTTC TAGTTGCGGC ACCCATAAGG CCAATGATGG CTCAGTTTGT TCGTTACCAC ATAAGTGAAA TGCACGTAAT AGCGTACAAC GAAGTGCCCG ACAACAAACA AATTACCATA GAGGCAACCA TAGGAGCCGA TGTGGTAAAC GGCGGAAAGC AGCGCTAA
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Protein sequence | MPQPFYDHLK SLPGTITGKS TLDGIRGAGR GNLSVPILLL MLLGMMTLPL PAFLLDAFFS FNIALSIVVL LVAVYSLRPL DFAVFPTILL IATLLRLALN VASTRVVLLE GHQGGDAAGK VIQAFGEVVI GGNYAVGLVV FIILIIINFV VVTKGAGRIS EVSARFTLDA MPGKQMAIDA DLNAGIIDQD EARTRREDVA SEADFYGAMD GASKFVRGDS VAGILILIIN ICGGLLVGMV QHQLEFSDAL EKYVLLTIGD GLVAQIPSLL LSVAAAIMVT RVNSSEDMNR QVLSQMFESP KALAVAGCII FIMGAIPGMP HFPFITLAII CGILAYYIHF RSQEAEVVEV GNARGFTQSS PSGQTGAQPS MPAGNMPAIE NQSARQGNPP PQSSEPTEVS WDDVTPVDLV GLEVGYRLIP LVDKGQGGEL LGRIKGVRKK LSQDLGFLIP AVHIRDNLDL LPSGYRITLM GVSIGEGEVF PDKFLAINPG QVFGSLQGTK TKDPAFGLEA IWIDEAQREQ AQTLGYTVVD PSTVVATHLN QIIQTHTHEL LGHEEVQKWL DLLGEKSPKL VEELVPETLS INQLLKTLQG LLREQVPIRD MRTIAEALAA HGNKSMDTTA LTSIARVSLA RQIVQNIVGQ DPNLPVITLD PSLEQLLLQS VQQAQKAGAS DGAFIEPQLA ERLNKSLVET AKKQEMAGRP IVLLVAAPIR PMMAQFVRYH ISEMHVIAYN EVPDNKQITI EATIGADVVN GGKQR
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