Gene Sde_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2159 
SymbolmotC 
ID3967543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2751386 
End bp2752126 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content46% 
IMG OID637921249 
Productflagellar motor protein 
Protein accessionYP_527631 
Protein GI90021804 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.193133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATTC TCAGCGTAGT AGGTGTAATA ATTGGCTTTG CCGCGCTGTT AGGCGGAAAC 
TTCCTAGAAG GAGGCAATTG GACATCCCTA GTCAATGGGC CGGCGGCCCT TGTTGTAGTG
GGTGGTACTT TAGGGGCGGC TATTTTGCAA ACCCCTTATA GCGGTATAAA GCGCTCCCTT
ACACTATTCA AATGGATCTT TAAGCCCCCG CGCTTACATT TTAAGTCGGG CATTAAACAA
GTTGTAAGCT GGGCCATGGC TGCCCGTAAA GAAGGCTTAC TTGGCTTGGA AAATATTGCC
GAAAAAGAAA AAGATAGCTT CGCCAAAAAA GGTTTACAAC TGTTGGTTGA TGGTAGCGAA
ACAGATGTTA TCCGCCACGT AATGGAAACC GATTTAATTG TAGCCGAGCA GCGCGATCAC
GATGCCGTAC AGTTTTACGA AAGCATGGGC GGCTACGCAC CCACCATTGG TATTATTGGT
GCAGTAATGG GGCTTATTCA TGTTATGCAA AATCTTGCAG ACCCGGCCGA ACTCGGCCCC
GGCATAGCTA TAGCATTTGT TGCCACAATT TACGGGGTGG CATTTGCCAA CTTATTTTTA
TTGCCCGTCG CCAATAAACT AAAAGCCTGT ATCAAACAGC AATCGCAATT CAGAGAATTA
CTTGTAGAGG GCATAATCGC CATAGCAGAC GGTGAAAACC CAAAAGTAAT TGAAATGAAA
TTAAGCGGTT ACCTGCACTA G
 
Protein sequence
MDILSVVGVI IGFAALLGGN FLEGGNWTSL VNGPAALVVV GGTLGAAILQ TPYSGIKRSL 
TLFKWIFKPP RLHFKSGIKQ VVSWAMAARK EGLLGLENIA EKEKDSFAKK GLQLLVDGSE
TDVIRHVMET DLIVAEQRDH DAVQFYESMG GYAPTIGIIG AVMGLIHVMQ NLADPAELGP
GIAIAFVATI YGVAFANLFL LPVANKLKAC IKQQSQFREL LVEGIIAIAD GENPKVIEMK
LSGYLH