Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2159 |
Symbol | motC |
ID | 3967543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2751386 |
End bp | 2752126 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921249 |
Product | flagellar motor protein |
Protein accession | YP_527631 |
Protein GI | 90021804 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.193133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATTC TCAGCGTAGT AGGTGTAATA ATTGGCTTTG CCGCGCTGTT AGGCGGAAAC TTCCTAGAAG GAGGCAATTG GACATCCCTA GTCAATGGGC CGGCGGCCCT TGTTGTAGTG GGTGGTACTT TAGGGGCGGC TATTTTGCAA ACCCCTTATA GCGGTATAAA GCGCTCCCTT ACACTATTCA AATGGATCTT TAAGCCCCCG CGCTTACATT TTAAGTCGGG CATTAAACAA GTTGTAAGCT GGGCCATGGC TGCCCGTAAA GAAGGCTTAC TTGGCTTGGA AAATATTGCC GAAAAAGAAA AAGATAGCTT CGCCAAAAAA GGTTTACAAC TGTTGGTTGA TGGTAGCGAA ACAGATGTTA TCCGCCACGT AATGGAAACC GATTTAATTG TAGCCGAGCA GCGCGATCAC GATGCCGTAC AGTTTTACGA AAGCATGGGC GGCTACGCAC CCACCATTGG TATTATTGGT GCAGTAATGG GGCTTATTCA TGTTATGCAA AATCTTGCAG ACCCGGCCGA ACTCGGCCCC GGCATAGCTA TAGCATTTGT TGCCACAATT TACGGGGTGG CATTTGCCAA CTTATTTTTA TTGCCCGTCG CCAATAAACT AAAAGCCTGT ATCAAACAGC AATCGCAATT CAGAGAATTA CTTGTAGAGG GCATAATCGC CATAGCAGAC GGTGAAAACC CAAAAGTAAT TGAAATGAAA TTAAGCGGTT ACCTGCACTA G
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Protein sequence | MDILSVVGVI IGFAALLGGN FLEGGNWTSL VNGPAALVVV GGTLGAAILQ TPYSGIKRSL TLFKWIFKPP RLHFKSGIKQ VVSWAMAARK EGLLGLENIA EKEKDSFAKK GLQLLVDGSE TDVIRHVMET DLIVAEQRDH DAVQFYESMG GYAPTIGIIG AVMGLIHVMQ NLADPAELGP GIAIAFVATI YGVAFANLFL LPVANKLKAC IKQQSQFREL LVEGIIAIAD GENPKVIEMK LSGYLH
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