| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2157 |
|---|
| Symbol | |
|---|
| ID | 3967541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2749498 |
|---|
| End bp | 2750298 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637921247 |
|---|
| Product | putative plasmid partitioning protein |
|---|
| Protein accession | YP_527629 |
|---|
| Protein GI | 90021802 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTGTTT GGACTGTTTC CAACCAAAAG GGTGGGGTAG GCAAAACCAC CACCAGCGTT
GCGCTTGCAG GTTTGGCTGC CGAAGCGGGT AAGCGGGTAT TACTTATCGA TTTAGACCCG
CATGGCTCGC TTACAAGCTA CTTTCGTCTC GACCCTGATA TGCAGTTATC CAGCGTCTTT
ACTTTGTTTC AGGAGCGCAC AGCGCTAACA GAGTCGCTCA TAGAGAAAGT AACGGTGCGA
ACACCATACG CAGGTATATC GTTACTGCCC GCAGCCACCG CTTTGGCAAC GCTCGAGCGT
CAAGCAATAG GCGATGGTAT GGGGTTGGTT ATATCGCGCA CTCTGGCCAA GGTTACCGAC
CAATACGATC TGGCCATAAT CGACTGCCCC CCGCAGCTTG GTGTGCTTAT GGTTAATGCA
CTTGCGGCCT GTAGTCGTTT ACTTATTCCT GTACAAACCG AGTTTTTAGC CATTAAAGGG
CTAGAGCGTA TATTGCACAC CCTAGAAATG CTGGCTAAAT CGCGTAAAAA GCCGCTAAAT
CACATCATAT TACCCACTAT GTACGACCGG CGAACACAAG CATCTGTTTC TAGCTTACGT
ACCATTCGCA ACGATTATGG CGAATGTGTA TGGGCCGGCA AAATACCCGT TGATACAAAG
TTGCGAGATG CGAGCAGGGC GGGTGTACCA CCGCACTTAT TCGACCCCAA TGGCCGCGCC
GTAGAGGCTT ACCGGTCACT CTATAAGTTT GTACTGGCCA GTTATGAAAA AGAGCATATC
GCGATGGAGG CAGGTGAATG A
|
|---|
| Protein sequence | MIVWTVSNQK GGVGKTTTSV ALAGLAAEAG KRVLLIDLDP HGSLTSYFRL DPDMQLSSVF
TLFQERTALT ESLIEKVTVR TPYAGISLLP AATALATLER QAIGDGMGLV ISRTLAKVTD
QYDLAIIDCP PQLGVLMVNA LAACSRLLIP VQTEFLAIKG LERILHTLEM LAKSRKKPLN
HIILPTMYDR RTQASVSSLR TIRNDYGECV WAGKIPVDTK LRDASRAGVP PHLFDPNGRA
VEAYRSLYKF VLASYEKEHI AMEAGE
|
|---|
| |