| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2148 |
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| Symbol | |
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| ID | 3967532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2739614 |
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| End bp | 2742274 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921238 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_527620 |
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| Protein GI | 90021793 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0598325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGATA TAGCTAAAGA AATCCTTCCT GTCACGATTG AAGACGAACT GAAAAAGTCT
TACCTCGATT ACGCAATGAG TGTAATCGTA GGGCGTGCGC TTCCAGATGT GCGAGACGGC
TTAAAACCCG TGCATCGCCG CGTATTATTC GCAATGAGCG AATTGAATAA CGACTGGAAT
AAAGCCTATA AAAAATCTGC CCGTGTGGTA GGTGACGTAA TCGGTAAATA TCACCCGCAT
GGTGATTCCG CTGTATACGA CACAATTGTA CGTATGGCGC AGCCTTTCTC GTTGCGTTAT
ATGCTGGTAG ACGGGCAGGG TAACTTCGGT TCGATCGATG GCGACAGCGC CGCGGCAATG
CGTTATACGG AAATCCGTAT GGCCAAAATT TCGCACGAAC TGCTTGCCGA CCTAGATAAA
GAAACCGTCG ATTTTGTGCC CAACTACGAT GGCACAGAGC TTATTCCCGC CGTATTGCCA
ACCCGCGTGC CCAACTTACT AGTAAACGGC TCGTCCGGTA TTGCTGTAGG TATGGCAACT
AACATTCCGC CGCACAACTT GCGCGAAGTG ATTAAAGGTT GTTTGGCGCT TATCGATAAC
CCAGAAATTA CTATCGATGA GTTAATGGAG CATATTCCTG GTCCAGATTT CCCAACGGGT
GCCATTATTA ATGGCCGTGC AGGTATTTTG CAGGCATACC GCACTGGTCG TGGTCGTATC
TATGTTCGCG CGCAAGCCGA AGTAGAAACC AACGAAAAAA CCGGCCGCGA AACCATTGTT
ATTAATGAAA TCCCTTACCA GGTAAACAAA GCGAGATTAA TCGAAAAAAT CGCCGAGCTG
GTAAAAGAAA AGAAAATAGA AGGCATTTCA GAAATTCGCG ACGAGTCCGA TAAAGACGGC
TTGCGCGTAG TTGTAGAAAT TAAACGCGGT GAGATGGGCG AAGTTGTACT TAACAACTTG
TATGCTCAAA CACAGCTACA AAACGTATTC GGTATTAATA TCGTTGCGCT GGTGGATGAT
CAGCCCAAGC TATTAAACCT AAAAGAGTTG CTTGAATACT TTGTTAAACA CCGTCGCGAA
GTAGTTACAC GCCGTACGGT TTACTTGTTG CGCAAGGCGC GTGAGCGCGG CCATGTGTTA
GAAGGCCAAG CTGTAGCTAT TGCCAATATC GACGAAGTAA TTACTTTAAT TAAGTCTTCG
CCAACCCCTG CCGATGCGCG CGACGCCATG CTTGCTCGCG GCTGGCCAGT AGGTGCGGTA
AGTGAATTCC TTGATCGCGC TGGCGAAAAC GCTTGTCGCC CAGATGGCTT ACCAGAAGAA
TTTGGTTTAC GTGAAGATGG CAGCTACTAC TTATCGCCGG TTCAGGTTCA AGCCATTCTA
GATTTACGTC TCCACCGTTT AACGGGTATG GAGCACGATA AATTACTTGC TGAATACGAA
GAGAAATTAA TTCAAATTGC AGGCTACTTA GAAATTTTAG GTAACCCTGA GCGTTTGATG
AACGTAATTC GTGAAGAGCT TGAAGTTATT TATAACGATT ACGGCGATGA GCGTCGTACT
GTTATTCAGC AAAGCATGAC CGATCTTACC CACGAAGATC TCATCAGCGA AGAAGATCGC
GTAGTGACTA TTTCGCACGG TGGCTATGCT AAGAGCCAGC CGTTAGATGC ATACCAAGCG
CAACGTCGCG GCGGCATGGG TAAGGCGGCT ACCTCGGTTA AAGATGAAGA TTTCGTAGAG
CATCTATTAA TTGCTAATAC TCATGATTAC TTATTGTGCT TTACCAGCGT AGGTAAAGTG
TTCTGGCTAA AGGTATACCA AATACCCGTT GCTGGTCGTC AATCTCGTGG TCGACCTGTT
GTGAATTTAT TGCCGCTAGA AGAGGGCGAA CGCATTACTA GCATACTGCC TGTGCGTGAG
TTCGACGACG ATCACTTTAT CTTTATGGCG ACAGCAGACG GCACAGTGAA GAAAACACCA
TTGTCGCAAT TTGCTCGTCC ACGTAGCGTT GGTTTACGTG CTATCGATTT GGTTGAAGGC
GACCACTTGG TAGGCACCGC AATTACAGAC GGCACAAAAG ATATTATTTT GCTTACTTCT
GCTGGTAAAG CTGCACGCTT TAGCGAAGAA AATGTTCGCT CTATGGGCCG AGTTTCACGC
GGTGTACGCG GTGTGCGCAT GGCCGACGAC GTAAGTGTAA TAGCCATGGT TGTGCCGGAA
GAAGGCGGTA AAGTACTTAC TGTAAGTGAA AACGGCTTTG GTAAGCGTAC CGAAGTTACA
GAATACCCCG CAAAAGGCCG CGGTTCGCAA GGCGTAATTG CTATGCAGAT GTCTGAGCGT
AACGGCTGTT TGGTTGGTGC TACTCAGGTA TTTGAAGGCG ATGAAATTAT GCTTATTTCT
AACCAGGGTA CCTTGGTTAG AACACGTGCA GACGAAGTAT CGTTATCTGG CAGAAACACT
CAGGGTGTTC GCTTAATTCG CGTTAAAGAG GGCGAACATA TTGTTGGCCT AGAGCGAATA
GATGAGCCAC CTGTGCCAGA AGCCGTTGAA GGCGGCGAAG AATCTGCAGT GGTAGAAAAT
ACAGCAGATG CTAACGAAGC GAATGTGAAC GCTCCCGATG TGAGTGGCGC AGACGAAGAC
GCAACTGGTG ACGACGCATA G
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| Protein sequence | MGDIAKEILP VTIEDELKKS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMSELNNDWN
KAYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM
RYTEIRMAKI SHELLADLDK ETVDFVPNYD GTELIPAVLP TRVPNLLVNG SSGIAVGMAT
NIPPHNLREV IKGCLALIDN PEITIDELME HIPGPDFPTG AIINGRAGIL QAYRTGRGRI
YVRAQAEVET NEKTGRETIV INEIPYQVNK ARLIEKIAEL VKEKKIEGIS EIRDESDKDG
LRVVVEIKRG EMGEVVLNNL YAQTQLQNVF GINIVALVDD QPKLLNLKEL LEYFVKHRRE
VVTRRTVYLL RKARERGHVL EGQAVAIANI DEVITLIKSS PTPADARDAM LARGWPVGAV
SEFLDRAGEN ACRPDGLPEE FGLREDGSYY LSPVQVQAIL DLRLHRLTGM EHDKLLAEYE
EKLIQIAGYL EILGNPERLM NVIREELEVI YNDYGDERRT VIQQSMTDLT HEDLISEEDR
VVTISHGGYA KSQPLDAYQA QRRGGMGKAA TSVKDEDFVE HLLIANTHDY LLCFTSVGKV
FWLKVYQIPV AGRQSRGRPV VNLLPLEEGE RITSILPVRE FDDDHFIFMA TADGTVKKTP
LSQFARPRSV GLRAIDLVEG DHLVGTAITD GTKDIILLTS AGKAARFSEE NVRSMGRVSR
GVRGVRMADD VSVIAMVVPE EGGKVLTVSE NGFGKRTEVT EYPAKGRGSQ GVIAMQMSER
NGCLVGATQV FEGDEIMLIS NQGTLVRTRA DEVSLSGRNT QGVRLIRVKE GEHIVGLERI
DEPPVPEAVE GGEESAVVEN TADANEANVN APDVSGADED ATGDDA
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