| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2146 |
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| Symbol | |
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| ID | 3967530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2736228 |
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| End bp | 2738465 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921236 |
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| Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_527618 |
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| Protein GI | 90021791 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.470632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACACTG CACTGGTAAT TAATAAATTA GTTGTAGTTG GTATAGGCCT TATTGGTGGC
AGTTTAGCGG CTGCCTGTAA AAAGCGCGGC GTGTGTAGCG AAGTAATTGG CGTAGCGCGC
AGAGCAGAAG TTTGCGAGCG TGCTGTTGCA AATGGAGTGG TAGATAGAGC CACAACTCAA
ATAAGTGAGC TAGCTGGCGA GCTCGGCGAA GGGGATGTGG TTTTTATTGC CGTGCCCACG
CTTACTGTAA AAAAAGTTTT AGCAGAAATA AAAAGCTGTT TATCGCCAGC CGTAACCATT
ACCGATGGTG CCAGTGTGAA AGGCAGCGTA CGCGACGATG TTGTTGCTAT TTACGGCGGC
GAACCTAGCC AAGTTGTATT GGGCCACCCA ATTGCTGGGT CCGAAAAAAG CGGTGTAGAT
GCGGCAGACC CAGAGCTTTA TGTTGATCAC CGAATAATTC TTACCCCCTT AAAAGGTAAT
GGTGTCAACC ACATAGAGCG CGTAACGAAA ATGTGGCAAG CCGTTCAGGC CGAAGTGCTT
GAAATGGATG TAGACGAGCA CGATGCCGTA CTTGCATCTA CTAGTCATTT GCCACACGCG
ATTGCTTTTT CGCTCGTCGA CACACTTGCG CACGACCACC AAAACGAAAA TATCTTCCGC
TATGCAGCGG GAGGTTTTAG AGATTTCACT CGGATAGCAT CCAGCGACGC AACCATGTGG
CGCGATATTA TGCTGTCAAA CAAACCGGCC GTACTTTCAG CCATCGACAT GTTTGTAGCG
AACCTAACAC GGTTGCGCGG CATGATCGAA GCGGAAGACG CCACTAACAT TACCGGCGTG
TTTACACGCG CAAAAGCAGC GCGCGACCGG TTTACTAACA TGCTATCTCA TCAGGCGTAC
AGTAAAACTA TGCAAGAAAA TGCTCACTCC CACATCGTAT ATAAAGTTGC CCCAGGCGGA
ACCGTACAAG GCACAATTCG TGTTCCTGGT GATAAATCTA TTTCTCACCG CTCAATTATG
TTGGGTTCGC TCGCCGAGGG TGTAACACAT GTAGAAGGCT TTTTAGAGGG CGAAGACGCA
CTTGCAACTC TACAAGCCTT CCGCGATATG GGCGTAGTAA TAGAAGGGCC AGAAGATGGT
CGTGTGACTG TTCACGGTGT TGGTTTGCAC GGTCTGCAGG CACCAAGTGG CCCGCTGTAT
GTTGGTAACT CTGGTACCTC AATGCGTTTG CTGGCAGGTA TTTTGGCTGG TCAAAAGTTT
GAATCTGAAC TTACCGGTGA TGAATCTTTA ACAAAGCGAC CAATGAATCG CGTTGCTTTG
CCATTGGCTG AAATGGGCGC TTCAATTGCC ACAGCTAACG AAGGCCGTCC ACCGCTAAAA
ATTCACGGCG GCGCAGCGCT TAAAGGTATT AATTACGATA TGCCAATGGC GAGCGCACAG
GTTAAATCTT GCTTGTTGTT AGCCGGTTTG TACGCTGAAG GCAAAACCAG CGTAACCGAG
CCTGCGCCAA CACGTGATCA CACAGAGCGT ATGTTGCGTG GTTTTGGTTA CGATGTGCAG
CGCACTGGCG ACACCATTAC GGTTGAGTCT GGTGGCAAGC TTACCGCTAC TGATATTGAT
ATTCCTGCAG ACATTTCTTC TGCCACCTTC TTTTTGGTTG CCGCTGCAAT TACACCTGGG
TCGGATATTA CGCTTACCCA CGTAGGTATA AACCCAACGC GCATTGGTGT AATTAATATT
CTAAACCTTA TGGGCGCGAA TATTGAGCTA AGTAATGAGC GCGAAGTGGG CGGCGAGCCA
GTAGCGGACA TCCGCTTGCG CTACGCACCG CTCAAAGGTA TCGAAGTGCC TGAATCTCAA
GTGCCGCTTG CAATTGATGA ATTCCCAGCA CTAATGGTGG CCGCGGCCTG CGCCGAAGGC
ACTACCGTAA TTACTGGCGC CGAAGAGTTA CGTGTAAAAG AAACAGATCG TATTCAGGCT
ATGATCGATG GCTTAACCAC TCTCGGTATT AAGTGTCATG CAACCGAAGA TGGCGCCATT
ATTGAAGGTG GGCAGTTGGG TGGTGGTGAG GTAGAAAGCT TCCATGATCA CCGTATTGCC
ATGTCATTTA CCATTGCTGC TCTGCGTGCT TCGGGCGAAA TTACAGTAAA TAATTGTGCA
AACGTGTCCA CTTCGTTCCC TAACTTCACC CAGTTAGCAA AACAAGTAGG AATAAGCTTA
GAAGTCATTC GTTCTTAG
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| Protein sequence | MNTALVINKL VVVGIGLIGG SLAAACKKRG VCSEVIGVAR RAEVCERAVA NGVVDRATTQ
ISELAGELGE GDVVFIAVPT LTVKKVLAEI KSCLSPAVTI TDGASVKGSV RDDVVAIYGG
EPSQVVLGHP IAGSEKSGVD AADPELYVDH RIILTPLKGN GVNHIERVTK MWQAVQAEVL
EMDVDEHDAV LASTSHLPHA IAFSLVDTLA HDHQNENIFR YAAGGFRDFT RIASSDATMW
RDIMLSNKPA VLSAIDMFVA NLTRLRGMIE AEDATNITGV FTRAKAARDR FTNMLSHQAY
SKTMQENAHS HIVYKVAPGG TVQGTIRVPG DKSISHRSIM LGSLAEGVTH VEGFLEGEDA
LATLQAFRDM GVVIEGPEDG RVTVHGVGLH GLQAPSGPLY VGNSGTSMRL LAGILAGQKF
ESELTGDESL TKRPMNRVAL PLAEMGASIA TANEGRPPLK IHGGAALKGI NYDMPMASAQ
VKSCLLLAGL YAEGKTSVTE PAPTRDHTER MLRGFGYDVQ RTGDTITVES GGKLTATDID
IPADISSATF FLVAAAITPG SDITLTHVGI NPTRIGVINI LNLMGANIEL SNEREVGGEP
VADIRLRYAP LKGIEVPESQ VPLAIDEFPA LMVAAACAEG TTVITGAEEL RVKETDRIQA
MIDGLTTLGI KCHATEDGAI IEGGQLGGGE VESFHDHRIA MSFTIAALRA SGEITVNNCA
NVSTSFPNFT QLAKQVGISL EVIRS
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