| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2135 |
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| Symbol | |
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| ID | 3967519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2725856 |
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| End bp | 2726152 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921225 |
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| Product | hypothetical protein |
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| Protein accession | YP_527607 |
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| Protein GI | 90021780 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00481013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAGT CCGAGCTTAT TGAGCGTATA GCAGAGCGCC AAGATCAATT GTCTGCCAAG
GATATAGAGC TAGCAGTAAA ACTAGTGCTG GAATACATGT CGCAAGCATT GTCGACAGGT
GAGCGCATAG AAATACGCGG CTTTGGTAGT TTTTCCCTTC ATTTTCGCGC CCCGCGCACG
GGCAGAAACC CCAAAACGGG CGAATCTGTA ACGCTACCCG GTAAATACGT ACCCCACTTT
AAACCCGGCA AAGAAATGCG CGACAGAGTA AATGAGTCAA TCCAATCAGA AGGCTAA
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| Protein sequence | MTKSELIERI AERQDQLSAK DIELAVKLVL EYMSQALSTG ERIEIRGFGS FSLHFRAPRT
GRNPKTGESV TLPGKYVPHF KPGKEMRDRV NESIQSEG
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