Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2133 |
Symbol | |
ID | 3967517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2723070 |
End bp | 2724125 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921223 |
Product | ATPase |
Protein accession | YP_527605 |
Protein GI | 90021778 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0085223 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTAG GATTCGGAAT CCTCGCAGTA GCGTTTGTTA CTGCCTTTGT TGTAGTTAAA ATGTTAAAGC CAATTGCCTA CCTGGTAAAT TTAGTAGACA AGCCCGGCGG CCGCAAAGAC CACGACGGCG TAATCCCCTT AATTGGTGGT TTAGCAATTT ACACCAGTGT TTGCATTACC ACCTTCCTGT TTATAGAGCA GCCAATTTTT ATCCGCTTAT TCCTATTGGC TGGTGGCTTA ATAGTGTTTA TGGGCATGGT AGACGACCGC TATCAACTTT CTGCGCGGTT TCGTTTGGCT GGTCAATTTT TAATTGCCTG TATTTTTGTA TACGGCCTAG ATGTACACAT AGAAAGCTTC GGCGATTTAC TTGGTATAGG CGAGCTTAAT CCTGGTTGGC TTGGCTACCC ATTAGCTGTA CTTAGTTTAA TGGGCGTAGT AAACGCAATG AACATGCTAG ATGGTATGGA TGGCCTAGTA GGCTCCATTG CAATGGTAAG CTTTATTGGT TTAATCGGCC TTTTTGGTGC CGCAGGCCAC ACAACCTTCC AATACCTCTG CTTGGCATTT ACCGGCGCTA TAGCCGCGTT CCTAATTTTT AACTTATGGG GCAGCCCAAC CAAAAACTTC CGTAAAGTAT TTATGGGTGA TGCTGGCAGC ATGTTTTTGG GTTTAAGTTT AGGTGTTTTA CTTATAGAGG GTAGCCAGCA ACCTACAGCC GCGTTTAGCC CTGTAACCGC TCTATGGTTT GTACTGCTAC CTATGACAGA TATGTTCACC ATTATGTACC GCCGAATAAA AAGAGGGCGG TCGCCAATGG CACCGGATAG GACGCATATA CATCATATTA TTATTCGGGC TGGGTTTAGT CGTAAGCAGG CGCTTTATAT TGTGCTGGTG CTTCAATCAA TATTCGTTGT AACAGGTGTG CTTTTGCACA ATTCAACATA TGAGTGGCGA TCTTTCACTT TGGTTGTAAC TTTCGTGATT GGATACCAGC TATTTATGCG CCGAGCTTGG CTGTTTGTTA GGTGGAGCAA AAAACGCTTT GCATAG
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Protein sequence | MELGFGILAV AFVTAFVVVK MLKPIAYLVN LVDKPGGRKD HDGVIPLIGG LAIYTSVCIT TFLFIEQPIF IRLFLLAGGL IVFMGMVDDR YQLSARFRLA GQFLIACIFV YGLDVHIESF GDLLGIGELN PGWLGYPLAV LSLMGVVNAM NMLDGMDGLV GSIAMVSFIG LIGLFGAAGH TTFQYLCLAF TGAIAAFLIF NLWGSPTKNF RKVFMGDAGS MFLGLSLGVL LIEGSQQPTA AFSPVTALWF VLLPMTDMFT IMYRRIKRGR SPMAPDRTHI HHIIIRAGFS RKQALYIVLV LQSIFVVTGV LLHNSTYEWR SFTLVVTFVI GYQLFMRRAW LFVRWSKKRF A
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