| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2131 |
|---|
| Symbol | |
|---|
| ID | 3967515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2720245 |
|---|
| End bp | 2721321 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637921221 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_527603 |
|---|
| Protein GI | 90021776 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TGGTTACTGG CGGTGCTGGG TTTATTGGTT CGGCTGTTAT TAGGTATATC
ATTAACCAAA CCAAACACTC TGTTGTGAAT GTAGATAAGT TAACCTATGC GGGCAATTTA
CAGTCATTGG TTGGTGTTTC GTCAAGCTCT AGATACACGT TTGAGCAAGT TGATATTTGT
GATGCTGTAG CATTAAAGCG AATTTTTAAA TTACACGAGC CAAACATCGT TATGCATTTG
GCTGCTGAAA GCCATGTGGA CCGTTCTATT GATGGCCCAA GTGTATTCAT GCAAACCAAC
ATTATTGGTA CATATACATT ACTTGAGCAG GCTAGAGCAT ATTGGTTAAC ACTTAGAGGT
GAAAATAAAA CACAATTTAG ATTTCACCAT ATATCTACTG ATGAAGTGTT TGGTGACCTA
CCTCACCCAG ATTTCGTTAG ACAAAGCGGG GAGTTGCCGT TGTTCACTGA AGAAACAGGG
TACAACCCCA GTTCGCCGTA CTCTGCCAGT AAAGCAAGTT CAGATCATCT AGTTAAAGCT
TGGGCCAAAA CCTATGGGTT ACCGACCGTT ATCACTAACT GTTCCAATAA TTATGGTCCT
TATCACTTTC CTGAAAAGCT AATACCTTTA GTGATATTAA ATGCTGTAGC GGGTAAACCG
TTACCTGTTT ATGGAGAAGG TAACCAAATA CGAGACTGGT TATACGTAGA AGATCATGCG
GAGGCCTTAA TTTTAGTGGC GACAGAAGGT AAAGTAAGTG AAACTTACAA TATCGGTGGT
CATAACGAAA AGAAAAATAT AGAAGTAGTA CATGCTATTT GTAAAATATT GGATGAAGTA
AAACCACAAG CAACTAAGTA TGCAGATCAA ATTACATTTG TTGCTGACAG GCCTGGTCAT
GACATGCGTT ACGCAATTGA TGCCACTAAG ATACAAAAAG AATTAGGTTG GCAACCCAAA
GAAACTTTTG AGACCGGCCT ACGAAAAACA GTACTTTGGT ACCTGCAAAA CGAAGCTTGG
TGGGGAAATA TTTTATCAGG TGAATATAGG TTAGAGCGAC TAGGTTTTAA CTGTTAA
|
|---|
| Protein sequence | MKIMVTGGAG FIGSAVIRYI INQTKHSVVN VDKLTYAGNL QSLVGVSSSS RYTFEQVDIC
DAVALKRIFK LHEPNIVMHL AAESHVDRSI DGPSVFMQTN IIGTYTLLEQ ARAYWLTLRG
ENKTQFRFHH ISTDEVFGDL PHPDFVRQSG ELPLFTEETG YNPSSPYSAS KASSDHLVKA
WAKTYGLPTV ITNCSNNYGP YHFPEKLIPL VILNAVAGKP LPVYGEGNQI RDWLYVEDHA
EALILVATEG KVSETYNIGG HNEKKNIEVV HAICKILDEV KPQATKYADQ ITFVADRPGH
DMRYAIDATK IQKELGWQPK ETFETGLRKT VLWYLQNEAW WGNILSGEYR LERLGFNC
|
|---|
| |