| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2128 |
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| Symbol | |
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| ID | 3967512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2717311 |
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| End bp | 2718447 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637921218 |
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| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
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| Protein accession | YP_527600 |
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| Protein GI | 90021773 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.315551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CGATAAAATT TAATGAGCCT TTTTTAGCGG GCAACGAGTT GAAATACTTA
AAAGATGTTT TTCGACAAGA TCATTTTTAT GGGAATGGTA AGTATACAAG ATTGTGCGCC
GAATTTATTC GAAAAAAGCT AAGTGTAGAA AATGTTTTGA TTACCGATAG TTGTACATCT
GCACTTGAGA TTGCGGCGCT GTTAATGAGA GAAACAGGTC AGGAGCAAGA AATTATTTTA
CCATCTTATA CTTTTTCTTC CACTGCTTCT GCATTTGCGA GGGCTGGGTT TAAGTTGGTT
TTTGCAGAAA TAGATCCGAA AACAATGATG ATGGATGTTC GAGATGTAAG AGAAAAGTTT
ACTCAAAATA CAGCAGCAGT AGTTGTAGTG CATTATGGTG GTTATTGTGC AGAAGTTAAT
GAGTTTAGAG CGCTTTGTGA TGCAAATGAA GTCTACCTCG TCGAAGATGC TGCGCAGGCA
TTTAATTGCT TTTTAAACAA TAAGGCGCTC GGCACAATAG GTGATTTTGG TTGCTTTTCG
TTCCATGAGA CAAAAAATGT TCACGCAGGC TTATCTGGTG CATTAATTAT AAAAGACAAT
AGTTTTGTTA ATAGAGCTAC ATATATATGG GAGCGTGGAA CAAATAGGCA GGATGTTTTG
AAGGGGCTTG CAAACAAATA TTCTTGGGTT GAAATAGGTG GTAGCTTTTA TCCTACGGAA
TTACAAACTG CTTTTTTGTA CGCTCAACTG GAAGCGCTCG AAAGAAATAT AGAAGAAAGG
AAAGTGATTT ATGATGAATA TAAAATAGGT TTGGCTCCTT TAAAGTTAGC CGGTGTGGTG
TATTACCCAG AATTTCATGT TGATTATAAA TCTAATTATC ATGCATTTTT TGTGGTTTTT
AATAGTGAAA GTAAAGCAGA TCAGGTTCGA GAGTTCTTAA GGGCAAGAAA TGTTCATGCC
TATATTGGGT ATATTCCACT GCATTCTTCA CCAGTGGGGT TGAAAATGGG GTATGAAATT
AACTCCTTGC CAATAACAGA GAAATATTCA AAGCGAGTGC TCCGCTTACC ATTGCATAAT
AAGTTGACGC TTACTCAAGT TGCAGGAATA GTTGACTTAA TAAAAGGATG TATTTAG
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| Protein sequence | MMKTIKFNEP FLAGNELKYL KDVFRQDHFY GNGKYTRLCA EFIRKKLSVE NVLITDSCTS
ALEIAALLMR ETGQEQEIIL PSYTFSSTAS AFARAGFKLV FAEIDPKTMM MDVRDVREKF
TQNTAAVVVV HYGGYCAEVN EFRALCDANE VYLVEDAAQA FNCFLNNKAL GTIGDFGCFS
FHETKNVHAG LSGALIIKDN SFVNRATYIW ERGTNRQDVL KGLANKYSWV EIGGSFYPTE
LQTAFLYAQL EALERNIEER KVIYDEYKIG LAPLKLAGVV YYPEFHVDYK SNYHAFFVVF
NSESKADQVR EFLRARNVHA YIGYIPLHSS PVGLKMGYEI NSLPITEKYS KRVLRLPLHN
KLTLTQVAGI VDLIKGCI
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