Gene Sde_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2125 
Symbol 
ID3967509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2714051 
End bp2715118 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content37% 
IMG OID637921215 
Product4-alpha-L-fucosyltransferase 
Protein accessionYP_527597 
Protein GI90021770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.741737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG ACAAAAAAAA CGTAGTGCAT ATTTGCTCCT TCGATAAGTT TATAAAAGGG 
TTTGTTGAGT TCAATGAGTT AAATTGTAAT TCTTTCGACC ATGAATATTT TATTATTGGT
TATCATGAGA AGTACTTGCT GCCAGAGTTT GGTGACTTTA AAGTTATGCC GAGAGCCTAC
ACTGAGAAAA TAGGCTATCT TTGTCGTCTA TTTCGAAGAA TGATGTTTGC TGATAAGGTA
ATCGTGCACG GGCTCTTTGA TAATAAGTTG ATATTATTTT TAGTTGCTAA CTATACGTGT
CTTTCTAAGG TCTACTGGGT AATGTGGGGG GCAGACCTAT ACGTTAAAGA AGAAAAATGC
TTTAAAGAAA AAATAGTATC AAAGTTGCGG CGGGTAATAT GTTCAAGATT GGGTGGTGTG
GTTACTTACA TTAGGGGTGA TTATCAATAT GCGCAGCAAA GATGGGGCGT TGTCGGCAGG
TACTGTGATT GTATTATGTA TCCAAGCAAC ATATATGTAG AGCCGGAAGA GGAACGAGTA
CAATCTAATT CAGATGAAAA TGGCTCAAGT ATAAATATTT TAGTAGGGCA TTCGGCAGAT
CCGTCAAATA ATCATAAATG TATATTTGAT ATGCTCGCGG ATAGTGGCGT TGATAATATG
CGTATCTATG CGCCCTTGTC ATACGGAAAC GAAATGTACC GCGATGACGT TGTTCAATAT
GGGAAAGAAT TGTTTGGAGA TGATTTCCGA CCATTGACGA AATTTCTTCC CTTAAAAGAT
TACTTAGCAT TACTTGCTGA TATCGATATA GCAATTTTTG ATCATAAGCG ACAGCAGGCT
ATGGGGAATA CTATTAACTT GATTGGCTTG GGCAAAACTG TGTATATGCG AACAAATGTA
ACGCAGTGGC AGTTATTTAA TGAGTTGGGT GTTGCTGTTT TGGATCTTGA GCGTTTTGAG
GGGCAATTGT TGACGCAAGA GCAGCGGCGG AAAAATAATC AGATAATTAA AAAATACTTT
TCAGTAGAAA ACTATAAGAA TCAGCTAAAT AAACTATATG CTACATAG
 
Protein sequence
MAKDKKNVVH ICSFDKFIKG FVEFNELNCN SFDHEYFIIG YHEKYLLPEF GDFKVMPRAY 
TEKIGYLCRL FRRMMFADKV IVHGLFDNKL ILFLVANYTC LSKVYWVMWG ADLYVKEEKC
FKEKIVSKLR RVICSRLGGV VTYIRGDYQY AQQRWGVVGR YCDCIMYPSN IYVEPEEERV
QSNSDENGSS INILVGHSAD PSNNHKCIFD MLADSGVDNM RIYAPLSYGN EMYRDDVVQY
GKELFGDDFR PLTKFLPLKD YLALLADIDI AIFDHKRQQA MGNTINLIGL GKTVYMRTNV
TQWQLFNELG VAVLDLERFE GQLLTQEQRR KNNQIIKKYF SVENYKNQLN KLYAT