| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2117 |
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| Symbol | |
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| ID | 3967501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2706147 |
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| End bp | 2707271 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921207 |
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| Product | ubiquinone biosynthesis O-methyltransferase |
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| Protein accession | YP_527589 |
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| Protein GI | 90021762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.579852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.77541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGGA AAATAGCACT GATTACCGGG GTAACAGGTC AGGACGGATC TTATTTGTCT
GAGCTGCTAT TAGAAAAAGG CTATGAGGTG CATGGTATCA AGCGTCGGGC ATCCTTGTTT
AATACTGCGC GTGTAGATCA TATATATCAA GATAAGCATG AAGAAAATGC CAACTTTTTT
TTGCATTATG GAGATTTAAC TGATTCGTCA AATTTAACTC GCATTTTAAA AGAAGTGCAA
CCAGATGAGG TGTACAACTT GGGGGCGCAG TCACATGTTG CTGTTTCGTT TGAGTGTCCA
GAGTACACAG CGGATGTTGA TGCAATAGGT GCTTTACGTA TTCTAGAGGC TATTCGGTTT
TTAGGTTTGG AGAAGAAGAC GCGGTTTTAT CAAGCTTCAA CGTCCGAACT TTTTGGTGAG
GTTAAGGAAA TCCCGCAGAA TGAGTCCACG CCTTTTCATC CGCGCTCTCC TTATGCAGTG
GCTAAAATGT ATGCTTATTG GATTACTGTT AACTATCGTG AGTCATATGG TATGTTTGCC
TGCAATGGTA TTTTATTTAA TCATGAGTCG CCGCGTCGTG GTGAAACTTT TGTTACTCGT
AAAATCACCC GTGGTATTGC TAATGTGGCT CAGGGAGTAG AGAAATGTTT ATACTTGGGC
AATATGGATG CTCTTCGTGA TTGGGGGCAT GCGAAAGATT ATGTTCGAAT GCAGTGGATG
ATGTTGCAGC AAGCAGAGCC AGAAGATTTT GTTATTGCTA CAGGTAAGCA AATTTCGGTT
CGCGAGTTTG TTAAGTTGTC TGCAATAAAT GCGGGTTTCG AACTCGAGTT TAGTGGAGAG
CACATTAATG AAGTGGCCAC TGTAGTTTCT ATTGTAGACC CTAATAAGGC TCCTGCTTTG
AAAGTCGGGG ATCAAATTGT CAAAGTTGAC CCTAAATATT TTCGGCCAGC AGAGGTTGAA
ACTTTATTGG GAGACCCAGC AAAAGCCAAA GCGAAATTAG GTTGGGTGCC CGAAATATCA
GTGGAAGAAA TGTGTGCGGA AATGGTCGCT AGTGACCTAG GTCTGGCAAA GCAACATGCT
TTGCTTTTAG CTCATGGCCA TGATGTGAAT GTTTCTGTAG AGTGA
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| Protein sequence | MARKIALITG VTGQDGSYLS ELLLEKGYEV HGIKRRASLF NTARVDHIYQ DKHEENANFF
LHYGDLTDSS NLTRILKEVQ PDEVYNLGAQ SHVAVSFECP EYTADVDAIG ALRILEAIRF
LGLEKKTRFY QASTSELFGE VKEIPQNEST PFHPRSPYAV AKMYAYWITV NYRESYGMFA
CNGILFNHES PRRGETFVTR KITRGIANVA QGVEKCLYLG NMDALRDWGH AKDYVRMQWM
MLQQAEPEDF VIATGKQISV REFVKLSAIN AGFELEFSGE HINEVATVVS IVDPNKAPAL
KVGDQIVKVD PKYFRPAEVE TLLGDPAKAK AKLGWVPEIS VEEMCAEMVA SDLGLAKQHA
LLLAHGHDVN VSVE
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