Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2115 |
Symbol | |
ID | 3967499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2703010 |
End bp | 2704176 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921205 |
Product | DNA gyrase, subunit A |
Protein accession | YP_527587 |
Protein GI | 90021760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.539484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG TTGTTGTAGG CACAGGCTAT GTAGGTATGT CTAATGCCGT TTTGTTAGCC CAAAAATACC CCGTTGTGGC CTTGGATGTG GTGCCAGAGC GTGTGGAAAT GGTTAATTCC AAGCTTTCGC CTATTCAGGA TGTGGAAATC GAGGACTTTT TAGCACATAA GCCACTCAAC CTGGTAGCTA CTTTAGATAA AGCCGCTGCC TATGAAGGCG CAGATTTTGT AGTTATTGCT ACGCCAACAG ATTACGACCC AGAAACAAAC TACTTTAATA CCAATACTGT AGAGTCGGTA ATTAAAGATG TAATGACCCA TAACCCTAGT GCGGTTATGG TTATTAAATC TACTGTGCCA GTGGGTTACA CCGTGGATGT GCGTGCGCGT TTTGGTACGC CTAACGTTAT ATTCTCGCCC GAGTTCTTGC GTGAGGGCCG TGCGTTATAC GATAACCTTC ACCCATCGCG TATTATTGTT GGTGAGCGGT CTGAGCGTGC TGCCAAGTTT GCCGAATTGT TGCAAAGCTG TGCTATTAAA CAAGATGTAG AAGTTCTGTT TACCGATAGC ACAGAGGCAG AGGCCATTAA ATTGTTCTCT AACACTTATT TGGCTATGCG CGTAGCGTAC TTTAACGAGC TAGATACCTA TGCAGAAACC CATGGGTTAG ACTCTAAGCA AATTATTGAA GGGGTAGCGT TAGACCCACG TATAGGTAAG CACTATAACA ACCCTTCCTT TGGTTATGGT GGTTACTGTT TACCTAAAGA TACCAAGCAA CTACTGGCTA ACTACGCCGA CGTACCAAAT AACCTAATTC GCGCTATTGT GGATGCCAAC ACCACCCGCA AAGACTTTAT CGCCGATTCT ATAATCAAGA AAAACCCAGA GGTAGTAGGG GTGTATCGTT TGATTATGAA AACCGGGTCC GATAACTTCC GTGCCTCTGC TATTCAGGGC ATTATGAAGC GTATTAAAGC TAAGGGTATT CGTGTTGTGG TATTCGAGCC GGTGCTAGAA GAAGAAACAT TCTTCGGCTC GGATGTAATA GCCGATTTTG ATGAGTTTAA AGCTTTAAGT AGCGTTATTC TTGCCAACCG CATGGTGGAA GAGCTAGCCG ACGTGCGCGA TAAAGTGTAC ACGCGCGACC TATTTAACAA CGATTAG
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Protein sequence | MKIVVVGTGY VGMSNAVLLA QKYPVVALDV VPERVEMVNS KLSPIQDVEI EDFLAHKPLN LVATLDKAAA YEGADFVVIA TPTDYDPETN YFNTNTVESV IKDVMTHNPS AVMVIKSTVP VGYTVDVRAR FGTPNVIFSP EFLREGRALY DNLHPSRIIV GERSERAAKF AELLQSCAIK QDVEVLFTDS TEAEAIKLFS NTYLAMRVAY FNELDTYAET HGLDSKQIIE GVALDPRIGK HYNNPSFGYG GYCLPKDTKQ LLANYADVPN NLIRAIVDAN TTRKDFIADS IIKKNPEVVG VYRLIMKTGS DNFRASAIQG IMKRIKAKGI RVVVFEPVLE EETFFGSDVI ADFDEFKALS SVILANRMVE ELADVRDKVY TRDLFNND
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