| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2114 |
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| Symbol | |
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| ID | 3967498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2701453 |
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| End bp | 2702913 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921204 |
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| Product | chorismate mutase, gamma, beta and epsilon |
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| Protein accession | YP_527586 |
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| Protein GI | 90021759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.731271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT CAAAATCTAA GTTTCCCCAA TTTATTCACC ATGGTGCTGT TGACGGTGTT
ACCGGCAGCT GCCACCGCTT GATTGCTTCT GAAAATTGCC ATTACTTAAT TGACTGCGGT
TTGTTCCAAG GGGATGAGCT GGGCGGTGAG GGTGGCTCTG GTGGTGATTC TGTATTGCAA
AAGCATCAAA TAGAGTTTGA TTTGACTCAC GTTAAAGCGT TAATTGTTAC GCATGTTCAT
ATCGATCATA TTGGTCGGTT GCCTTACTTA ATGGCGGCTG GTTTTAAGGG GCCAATTTAT
TGTAGTTACC CATCGGCTAA ATTGCTGCCA CTCGTAATAG AAGATGCGCT AAAAATAGGG
TTTACTCGGG ATAAAACCTT AATAAAAAAC TTCTTAAAAC AAGTGGATAA ACAGCTAAAA
CCGCTACCTT ACGGTACATG GCAAGCACTG GATGCAGAAG ACGGTTTACA GGTTAAGTTA
AAGCTGCAGC GTGCGGGGCA TATATTGGGT TCTGCTTATG TGGAGTTAGA TGTAAAAGGG
GATGATTACG CCCACAGGGC GGTGTTCTCT GGCGATTTAG GTGCGCCCTA TGCGCCATTA
TTACCAGCAC CACGCTCGCC CTACAAAGCA GATACTCTGG TAATAGAGAG CACCTACGGC
GATAAGTTGC ACGACGATAG AAAAGGCCGT AAAAAACGTT TAAAAGCCGC TATAGAGCAT
GCTATTGCAA ATGGCGGTAC AGTGATGGTA CCTGCGTTTA GTATTGGCAG AACCCAAGAG
CTGCTCTACG AGCTAGAAGA GCTTATAACC AAGGGGGACG AGCGCTGGCA AGGCCTTGAA
GTAATAGTAG ATTCACCCCT CGCGGCCAAG TTCACCGAGG TATATAAGCA GCTAAAGCCC
TATTGGGATG CTGAGGCTCA TAAAAGACTG GCGGCGGGGC GGCATCCACT AAGTTTTGAT
AACTTGTATA CGGTAGATTC CCACAAGGAG CACCTAAGTA CCGTAAGTTA CCTTGCCAAA
TCTAGCCGCC CAGCGGTGGT ATTGGCTGCC AGTGGAATGG CCAATGGCGG CCGTATACTC
AATTACCTAA AGGCCATGCT CGCCAACCCT CGCCACGCGG TGTTGTTTGT GGGCTATCAA
GCCCGCGGCA CCTATGGTCA CTCCATCCAA CGCTATGGCT CTAATAATTT AAATAGCCGA
CAAGACGAGC AAGGTGGCAA GAGTGGCTGG GTAGATATAG ACAGCAAACG CATAGATATT
AACGCGCAGG TATTCACCAT AAGCGGCTAC AGTGCCCATG CAGATCAAAA AGACCTGATC
AATTTTGTTA AACGAATGCG CCACTGGCCA AGCCAAATTC GTATTGTGCA TGGCGATGCT
AAAGCGAAAC GCGTATTAAA AACAAAGTTA TTAGAGCTGG CAAAAAATGC GGCTAAGCCG
TTAAAGGTTG TTATTCCCTA G
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| Protein sequence | MSSSKSKFPQ FIHHGAVDGV TGSCHRLIAS ENCHYLIDCG LFQGDELGGE GGSGGDSVLQ
KHQIEFDLTH VKALIVTHVH IDHIGRLPYL MAAGFKGPIY CSYPSAKLLP LVIEDALKIG
FTRDKTLIKN FLKQVDKQLK PLPYGTWQAL DAEDGLQVKL KLQRAGHILG SAYVELDVKG
DDYAHRAVFS GDLGAPYAPL LPAPRSPYKA DTLVIESTYG DKLHDDRKGR KKRLKAAIEH
AIANGGTVMV PAFSIGRTQE LLYELEELIT KGDERWQGLE VIVDSPLAAK FTEVYKQLKP
YWDAEAHKRL AAGRHPLSFD NLYTVDSHKE HLSTVSYLAK SSRPAVVLAA SGMANGGRIL
NYLKAMLANP RHAVLFVGYQ ARGTYGHSIQ RYGSNNLNSR QDEQGGKSGW VDIDSKRIDI
NAQVFTISGY SAHADQKDLI NFVKRMRHWP SQIRIVHGDA KAKRVLKTKL LELAKNAAKP
LKVVIP
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