Gene Sde_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2112 
Symbol 
ID3967496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2699039 
End bp2699764 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content46% 
IMG OID637921202 
ProductSulfate adenylyltransferase, small subunit 
Protein accessionYP_527584 
Protein GI90021757 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.900528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.825144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCCAG TTAGTTATCA GTTTAGTTTA CGCTGCCTGT TTACGTGCCT TATGCGTTTT 
GCTGCTGCGT GGTGTTTGTT GGGTTGTGCT GCAGTGACGC AGGCGCAAGC AGAACAGGAT
AGGCCCATAC AGCTTTCCCC AAAGCTGTTA GATAGTATTG CTAAAAAGTA TGGCGATAGC
GCTGTTGCAA GGTTGAATGA CTGGACTGCT CTAATGGAAA GCGGTGGTTT GCCCAGTATT
GAGGAAGCCG CAAAGCTTGC ACAGGCGAAC GAGTTTTTTA ACAGGGTGCA GTGGTTGTCG
GATTTAGTGC ACTGGGGGCA AGAAGATTAC TGGGCCACAC CGGTGGAAAC GCTAGCGAGC
AATGGTGGCG ACTGCGAAGA CTTTTCTATT GGTAAATATT TTACCTTGCT GCAAACCAAG
GTAGACAATG AAAAGCTGCG TATCACGTAT GTAAAATCCC TAACGTATAA TCAGGCGCAT
ATGGTACTTG CATACTACCC GCAGCCAGAT GCAGAGCCAT TAATATTGGA TAATATAAAT
AAAACCATTT TGCCTGCTTC GCAGCGCGAC GATTTGTTGC CAATTTATAG CTTTAATGGC
GAAAGTATTT GGCTAGCTAA GGCCAGAGGT AAAAAATTGA ATGCAGATAG CCAAAAAAGC
TTACCGCAAT GGAAGGGGGT AAATGAGCGT TTACTGCAAG AGTTGAATGG TGAGGCTGAG
CGGTGA
 
Protein sequence
MGPVSYQFSL RCLFTCLMRF AAAWCLLGCA AVTQAQAEQD RPIQLSPKLL DSIAKKYGDS 
AVARLNDWTA LMESGGLPSI EEAAKLAQAN EFFNRVQWLS DLVHWGQEDY WATPVETLAS
NGGDCEDFSI GKYFTLLQTK VDNEKLRITY VKSLTYNQAH MVLAYYPQPD AEPLILDNIN
KTILPASQRD DLLPIYSFNG ESIWLAKARG KKLNADSQKS LPQWKGVNER LLQELNGEAE
R