| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2104 |
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| Symbol | |
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| ID | 3967488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2687899 |
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| End bp | 2689353 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921194 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_527576 |
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| Protein GI | 90021749 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.108932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACA AATATGACGT TATCGTTATT GGTTCTGGTC CTGCGGGCTA CGTGGCAGCT
ATTCGCTGTG CGCAATTGGG TTTGAAAACA GCCTGTATTG AAAAATGGAA AGATAAAGAC
GGCAAGGGTG TGAACGGCGG TACTTGTCTA AACGTAGGTT GTATACCTTC AAAAGCGTTG
TTGGATAGCT CTCATCGCTA CGAAGATGCG CACAAAGGTT TTGCATCTCA CGGTATTAAA
GCGCCTAACG TTGAAATTGA CGTGCCTTCA ATGATTGCAC GTAAAGATAA AATTGTTAAG
CAGATGTCTG GCGGTATTAC TGGTTTGTTC CAAGCTAACA AAGTTACTTC TTTGTACGGA
ACAGGTAAAT TACTTGCTGG CCGCAAAGTG CAATACGTTG CATTAGACGG TAAAGAAGAA
GTGTTAGAAG CAGAGAACGT AATTCTTGCT TCTGGTTCTA TCCCTGTAAA CATTCCTGTT
GCACCAGCAG ATGGCGATGT AATTGTTGAT TCAACTGGCG CATTGGAATT CCAAGCTGTA
CCTGAGCGTT TAGGTGTAAT TGGTGCTGGT GTAATTGGTC TTGAGCTAGG TAGTGTTTGG
GGTCGTTTGG GCTCTAAAGT GGTTTGTTTA GAAGCCATGG ATAGTTTCTT GGCTATGATG
GATCAGCAGA TTGCTACCGA AGCGAAGAAA ATTTTGGTTA AACAAGGTTT AGATATCCGT
CTAAGCTGTC GTGTAACTGG CACCGAAGTT GTAGAAGCTA AGGGCAAAAA AGAAGTTATC
GTTACTTACA CCGATAAAGA CGGCAACGAA GCGAAAGAAA CTTTCGATAA GTTGATTGTT
TGTGTTGGTC GTCGTCCGTT CACTGACGGC TTGTTGTCTG AAGACAGCGG CGTTAAGTTG
GATGAGCGCG GTTCTATTTA CGTTAACGAT TTGTGCTCTA CTAGCGCGCC AGGCGTTTGG
GCTGTTGGTG ACGTTGTACG TGGCCCAATG TTGGCTCACA AAGGTTCTGA AGAAGGTGTG
ATGGTTGCAG AGCGCATTGC TGGCCAAAAA ACCGTAATGA ACTACGACAT TATTCCTAAC
GTAATTTATA CCCACCCAGA AATTGCTTCA GTTGGTAAAA CTGAAGAGCA ATTAAAAGCA
GATGGCGAAG CTTACGAAGT AGGTACTTTC CCATTCTTGG CAATTGGTCG CGCTGTTGCA
GCCGATTGCG CAGAAGGTAT GGTTAAAATG ATTGCTCACG CTGATACCGA TCGCGTATTG
GGTTGTCACA TTGTTGGCCC GAACGCGGCA GACCTTGTAC AGCAAGTAGC AATTGCTATG
GAGTTTGGCG CTACATCAGA AGATATTGGT ATGACTGTAT TCGGTCACCC AACTTTCTCT
GAAGCTGTTA AAGAAGCTGC GTTAGCGGTA CATGGTCATG CTATCCACAT GCCTAACCGT
AAAAAACGCA AGTAG
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| Protein sequence | MSNKYDVIVI GSGPAGYVAA IRCAQLGLKT ACIEKWKDKD GKGVNGGTCL NVGCIPSKAL
LDSSHRYEDA HKGFASHGIK APNVEIDVPS MIARKDKIVK QMSGGITGLF QANKVTSLYG
TGKLLAGRKV QYVALDGKEE VLEAENVILA SGSIPVNIPV APADGDVIVD STGALEFQAV
PERLGVIGAG VIGLELGSVW GRLGSKVVCL EAMDSFLAMM DQQIATEAKK ILVKQGLDIR
LSCRVTGTEV VEAKGKKEVI VTYTDKDGNE AKETFDKLIV CVGRRPFTDG LLSEDSGVKL
DERGSIYVND LCSTSAPGVW AVGDVVRGPM LAHKGSEEGV MVAERIAGQK TVMNYDIIPN
VIYTHPEIAS VGKTEEQLKA DGEAYEVGTF PFLAIGRAVA ADCAEGMVKM IAHADTDRVL
GCHIVGPNAA DLVQQVAIAM EFGATSEDIG MTVFGHPTFS EAVKEAALAV HGHAIHMPNR
KKRK
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