| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2098 |
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| Symbol | gpsA |
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| ID | 3967482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2680884 |
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| End bp | 2681960 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921188 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_527570 |
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| Protein GI | 90021743 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000129117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCAGC TACTTGTAGA GTTTTTCTCA CTCACAGAAA ATCAGGCATA CAATAATATG
AGTAGTAAAT ACACAGTAAC AGTATTGGGT GGCGGCAGTT TTGGTACAGC AGTAGCCAAC
ATAATTGCTA CTAACGGGCA TGTTTCACGC CTATGGATGC GCGATGCTGC GCGGGCAGAG
CGATGCCAGG CGTCTAGAGA AAACACTGAA TACCTGCCTG GTTATCCCCT GCACGATAAC
CTTGTGGCAA CTACCGATTT GATAGGCTCC GTAAGTACGA GCGATATTGT TGTTATCTCT
GTGCCTAGTC AGTCTTTTCG CGAAGTAGCC AAACTCGCTG CGCCGCATTT ACGTAAAGAT
ACTATTGTTA TTAGTACCAC CAAGGGTATC GACGCCGACG GTTTCTTTTT AATGAGCCAG
ATACTCGAGC AAGAGTTGAC CGATGTACGC ATAGGTGTAC TTAGTGGGCC GAACTTTGCG
AAAGAAATTG TGCAGAATCA ATACACTGGT AGTGTTGTGG CCAGTGAGCA TGACGAGGTA
TTAAAGTGCG TTCAGCAAGT TTTCTCGTCT AATACCTTTC GTATTTACAG CAACCCAGAT
AGATACGGGG TGGAATTAGG CGGCGCACTT AAGAATATTT ACGCCATGGT GACTGGTATG
GCTGCAGCAT TGGGCTGTGG TCACAATACG ATGGCAATGC TGCTTACCCG CAGTTTGGCG
GAAATGGGGC GATTTGCACG TGAGTTAGGT GCAGATTCCA TGACGTTTTT AGGTTTGGCT
GGTATGGGGG ATTTAGTTTT AACCTGTACG TCAGATCTCA GCCGTAACTA CCGCGTTGGC
TTTGCAGTTG GCCGAGGTAA ATCGCTTGAG CAAGCCGTTC AAGAAATTGG TCAAGTAGCC
GAAGGTGTGA ATACCTTGCG CATAGTTAAG AAAAAAGCAG AAGAATTGAA TGTGTATATG
CCGTTAGTCG ACGGCTTACA TGCGGTGTTG TTTGATAAGC AAGACTTGCA GCAGGTTATT
CAGGGCCTTA TGACCGGTGA AATGAGTAGT GATGTGGATT TACAAGGAGG CTTGTAG
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| Protein sequence | MLQLLVEFFS LTENQAYNNM SSKYTVTVLG GGSFGTAVAN IIATNGHVSR LWMRDAARAE
RCQASRENTE YLPGYPLHDN LVATTDLIGS VSTSDIVVIS VPSQSFREVA KLAAPHLRKD
TIVISTTKGI DADGFFLMSQ ILEQELTDVR IGVLSGPNFA KEIVQNQYTG SVVASEHDEV
LKCVQQVFSS NTFRIYSNPD RYGVELGGAL KNIYAMVTGM AAALGCGHNT MAMLLTRSLA
EMGRFARELG ADSMTFLGLA GMGDLVLTCT SDLSRNYRVG FAVGRGKSLE QAVQEIGQVA
EGVNTLRIVK KKAEELNVYM PLVDGLHAVL FDKQDLQQVI QGLMTGEMSS DVDLQGGL
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