| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2090 |
|---|
| Symbol | |
|---|
| ID | 3967474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2674116 |
|---|
| End bp | 2675258 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637921180 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | YP_527562 |
|---|
| Protein GI | 90021735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCGC TGCCGTATTG GCGCTTAGCT TTTTTCTACT TCGTTTACTT CGCAGTTATT
GGCGGTTTGT CTCCCTATTG GGGGCTGTAT TTAGAGCACA TTGGTTTAAC ACCTAAGTTA
ATTGGCGTGG TTATGGCCAT TCCCATGCTA ACGCGCATTG TGGCCCCAAA TATATGGGGT
TGGGTTGCCA GTCGAACCGG TAGGCCCTTG CAGGTAATGT TATTTGGCTG CGTGGGGGCT
GCGCTCTGCT TTATAGGGGT AATTTGGCGA AAAGATGTCG CGGGGCTAAT CGCTTTTACG
CTGGCATTTA GCTTTTTTTG GAATGCTATT CTCGCTCAGT TTGAAGTGCT TACACTTGGG
TATTTGAAAG ATACACCGGA AAAATACGGC CAAATACGCT CGTGGGGCTC TATTGGGTTT
GTATTGGTTG TAGCTGGCCT TGGTGTGGTT TTTGATTACC TGCCTATCTA TTTACTGCCT
TGGTGTATTT TCTTTTTCCT AATCGCTATT TTGATAGCTG CTTTTTCATT GCCAAATGAC
TCGGCCGCAA GGGGCTCGCA AACCAAAACA TCATTTGTGG CGGCTTTAAA ACAGCGCAAG
GTGGTGTACT TTTTAATTAC AGTTTTTCTT ATTCAATTTA GTCTTGGTAT TTTTCATGCG
TTCTATAGCT TGTATTTGGA TTATTACGGC TATAGCAAAA CAGCCATTGG CTCGTTGTGG
GCATTGGGCG CAATAGCAGA AATAGTGTTG TTTATGTCTA TGCCTGCATT GTTACGTCGG
TTTAGTATTA ATTGGCTACT TGGTTTGGCC ATTGTCACCA CAGCGTTGCG CTGGTTTTTG
TTGGGTGCTT ATCCTCAGTT GCTATGGGTG GTTATCATCG CTCAGCTATT TCACGCTTTT
ACATTTGGTT TAACCCATGC GGTGGCAATC GAATTTGTAC GCAGGCACTT CCCAGGTTCT
GCGCAGTCAC AGGGCCAGTC TTTTTACAGT GCAATTGGGT TTGGCGCATC TAACGCGTTA
GGCAGTTTGG CTGGCGGTGT AATTTGGGAT GTGAGTGTAG GCTTGCTGTT TAATGCTGCG
TTGCTCATTG TTATGTTTGC CGGCGCGGTA CATGTTTATC AAATGCGTAG CTCTGCAAGC
TAA
|
|---|
| Protein sequence | MHSLPYWRLA FFYFVYFAVI GGLSPYWGLY LEHIGLTPKL IGVVMAIPML TRIVAPNIWG
WVASRTGRPL QVMLFGCVGA ALCFIGVIWR KDVAGLIAFT LAFSFFWNAI LAQFEVLTLG
YLKDTPEKYG QIRSWGSIGF VLVVAGLGVV FDYLPIYLLP WCIFFFLIAI LIAAFSLPND
SAARGSQTKT SFVAALKQRK VVYFLITVFL IQFSLGIFHA FYSLYLDYYG YSKTAIGSLW
ALGAIAEIVL FMSMPALLRR FSINWLLGLA IVTTALRWFL LGAYPQLLWV VIIAQLFHAF
TFGLTHAVAI EFVRRHFPGS AQSQGQSFYS AIGFGASNAL GSLAGGVIWD VSVGLLFNAA
LLIVMFAGAV HVYQMRSSAS
|
|---|
| |