| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2085 |
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| Symbol | leuD |
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| ID | 3967469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2668876 |
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| End bp | 2669523 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921175 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_527557 |
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| Protein GI | 90021730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAGTT TTACTACACT AAACGGGCTT GCGGCACCTA TGGATAGGCC CAATGTGGAT
ACCGATTTAA TTATCCCTAA GCAGTTTCTT AAATCTATTC AGCGTACGGG CTTTGGAGCC
AACTTGTTCG ACGAGCTGCG CTATTTAGAT AAAGGCGAAC CTGGGCGAGA CAATAGCAAT
CGCCCCATTA ACCCAGATTT CCCTCTTAAC TTTAAAAGGT ACGAAGGGGC TTCTGTATTG
CTTGCACGTG AGAACTTTGG CTGCGGTTCA AGCCGTGAGC ACGCGCCTTG GGCGCTAGAC
GAGTATGGTT TTCACTGCAT TATTGCACCT AGCTTCGCCG ATATTTTTTT CAATAACTGC
TTTAAGAATG GCATCTTACC CATTGTTTTA GATGAAGAAA TTGTGGAATC TTTGTTTGTG
GAAATGTATC AAACAGAAGG CTATCGTCTT GTTATCGATT TGCCAGCTCA AACGGTGACA
ACGCCTTCGG GTAATAGCTA CTCATTCGAG GTGGACGAGT TCCGCAAGCA CTGTTTGCTG
AAAGGTTTAG ATGATATTGG CCTTACGCTG CAGCACGCCG ATAGCATTAC CGCTTATGAA
GCAGAGCGCG CAAAGCGTGC GCCTTGGTTG TTTGCTGCAT CTGAATAA
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| Protein sequence | MRSFTTLNGL AAPMDRPNVD TDLIIPKQFL KSIQRTGFGA NLFDELRYLD KGEPGRDNSN
RPINPDFPLN FKRYEGASVL LARENFGCGS SREHAPWALD EYGFHCIIAP SFADIFFNNC
FKNGILPIVL DEEIVESLFV EMYQTEGYRL VIDLPAQTVT TPSGNSYSFE VDEFRKHCLL
KGLDDIGLTL QHADSITAYE AERAKRAPWL FAASE
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