| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2081 |
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| Symbol | |
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| ID | 3967465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2661321 |
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| End bp | 2662190 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921171 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_527553 |
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| Protein GI | 90021726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.999551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAT TTGTATACTC AAGAAACTGT GAGGTGTTTG ACGGTACGCC AGTGCCAGAA
GGGATGCGTC GCGTGGTGCT GCAAGTGGAA TACGATGGCT CTCCCTATTG TGGTTTTCAG
CGTCAGCTAA CCGCGCCAAA TACGGTTCAG GCAGAGTTGG AGAAGGCGCT GTCTAGTGTC
GCAAATGAGC CTGTTACGAT AGTGTGCGCT GGGCGAACGG ATGCAGGGGT GCATGCTACA
TCGCAGATAG TTCACTTCGA TACCTTGGCA GGCAGGCCTA GCAAGGCCTG GTTGCAGGGG
GTAAACACGC ATTTACCATT TAGTATACGC GTTATATCTG CTAAAGAAGT TGGGTTTGAT
TTTCATGCGC GTTTTAGTGC TTTATCGCGT ACTTACCGTT ATGTGATTCA TGTTTCACAG
GTGCGCTCTG CCCATTTGGT GAATGGCGTA ACTTGGGTGA AGTTACCGCA GAAGCTAAGC
GGTCTGGATG TACCTGCAAT GCAGGAGGCG GCTAGCTTAT TGTTGGGTGA GCACGATTTT
ACCTCATTTC GAACGGTGCA CTGTCAGGCG GCTAGCCCTG TACGCACTAT GGAGGTGGCC
GATGTTGTGC AAATGGGTGA GTTTATTGTT GTTCAGGTAA CGGCAAATGC CTTTTTACAT
CATATGGTTA GGAATATTGT AGGAGTGTTG CTGCGTGTTG GGCGAGGGGA GCTGAAGCCT
TCGCGGGTAA CTGAGTTGAT TGAGCTGCGG GACCGGTCAC AAGCTGCAGA GACTGCGCCG
GCAGCGGGGC TATACTTCGT GAATGTTCAA TATCCAGAAA GGTTTGCTAT GCCTATGCAC
TGTCAAGGCC CTATTTTTCT GCCTTTATAG
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| Protein sequence | MTEFVYSRNC EVFDGTPVPE GMRRVVLQVE YDGSPYCGFQ RQLTAPNTVQ AELEKALSSV
ANEPVTIVCA GRTDAGVHAT SQIVHFDTLA GRPSKAWLQG VNTHLPFSIR VISAKEVGFD
FHARFSALSR TYRYVIHVSQ VRSAHLVNGV TWVKLPQKLS GLDVPAMQEA ASLLLGEHDF
TSFRTVHCQA ASPVRTMEVA DVVQMGEFIV VQVTANAFLH HMVRNIVGVL LRVGRGELKP
SRVTELIELR DRSQAAETAP AAGLYFVNVQ YPERFAMPMH CQGPIFLPL
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