| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2078 |
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| Symbol | |
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| ID | 3967462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2658314 |
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| End bp | 2659126 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921168 |
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| Product | tryptophan synthase, alpha chain |
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| Protein accession | YP_527550 |
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| Protein GI | 90021723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGTT TAAAGAAAAC TTTGTCAGAT TTGAAAGCTG CGCAAAAGAA GGCGTTGGTA
ACATATTTTG TAAATGGTGA CCCACGGCCG AGCGTTAGTT TAAAGGCTAT GCACGCACTT
GTTGAAGGTG GTGCGGATAT TATTGAGGTC GGTGTACCTT TTTCCGACCC TATGGCCGAA
GGACCAGTGA TTCAGCGCGG ACACGAACGT GCGCTAGAGC ACAATGTAAG CTTAAAAGGC
ACCTTGGCGC TTGTTAAAGA ATTTCGCAAA GCCAACAGCG ATACGCCCGT GGTGCTAATG
GGCTACGCAA ACCCTGTAGA GCGTATGGGC TATGAATTGT TTGCTGCGCA AGCTAAGGCC
GCGGGTGTAG ACGGCTTGCT AACAGTTGAT TTGCCGCCAG AAGAAGCCGT TGAGTTAAAT
AAAGAGTTGG TTGCAAACGG CCTAGAAAGT ATTTTCCTGT TGGCGCCAAC AACTACCGAA
GAAAGAATGA AAAAAGTCGT TGGTTTGGCC AGCGGCTTCT TGTACTACGT TTCATTAAAA
GGTGTAACCG GAGCAGGGCA CCTAGACGTA AATGCAGTAA AAGAGCGTGT TGAAAAAATT
TCATCTTTAA CTGACCTGCC TGTTCTTGTT GGGTTTGGTA TTAAAGACCC TGAATCTGCA
AAAAGCATTG GAGCGAATGC TGATGGCGTT GTAGTTGGTA GCGTGCTCGT AGACGCTATG
GGCAATGCTG CTAGTGAAAG CGACGAGGTT ATTTGCGAAA AAATTATTAA TATTGTGGCG
CCAATTAGAG CCGGCTTAGA CTCATTGGCT TAA
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| Protein sequence | MNRLKKTLSD LKAAQKKALV TYFVNGDPRP SVSLKAMHAL VEGGADIIEV GVPFSDPMAE
GPVIQRGHER ALEHNVSLKG TLALVKEFRK ANSDTPVVLM GYANPVERMG YELFAAQAKA
AGVDGLLTVD LPPEEAVELN KELVANGLES IFLLAPTTTE ERMKKVVGLA SGFLYYVSLK
GVTGAGHLDV NAVKERVEKI SSLTDLPVLV GFGIKDPESA KSIGANADGV VVGSVLVDAM
GNAASESDEV ICEKIINIVA PIRAGLDSLA
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