Gene Sde_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2075 
Symbol 
ID3967459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2655555 
End bp2656079 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content44% 
IMG OID637921165 
Productsuccinate dehydrogenase, flavoprotein subunit 
Protein accessionYP_527547 
Protein GI90021720 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACG GTTTAAAGCA AAGAATAATT GGTGCGCTTG TTTTACTGGC AATTGCAATA 
ATTTTTGTGC CTGTGTTTTT TGATCAAGAG CGTATAGTGC CGCTTGATCG TACAACTCAA
GTACCTCTCG CGCCAGAAAT TGAGCCTATC GAGATTGAAA AGCCCGTCGC ACAAAATGTA
GAAAAGTTTG AACCCGCTGT ACCGCCAGAA ACCATGTATA TTCCAGATGA AGAGCGCGAG
CAGCCCGATC ACAAGGAAGA GCCAAAGGTG TCTGAAGTTG GGGTGCCAGA AGGCTGGGTG
TTGCAAGTGG CGAGTTATAG GCATGAAACC CATGCAAAGG AAACACGCGA TAAATTAATC
GCAGAGGGGT TTTCTGCGTA CACCAAAAAT GTTGAAACAA GTAAGGGTGT TATGACGCGA
CTTTACGTAG GGCCCAAACT CGATAAGACT AGCTTGCTGG ATGACAAGAA AAGTATAGAT
AAAAAATACG GCGTAGACAC AATTTTACTT AGATATGAGC CTTAG
 
Protein sequence
MDDGLKQRII GALVLLAIAI IFVPVFFDQE RIVPLDRTTQ VPLAPEIEPI EIEKPVAQNV 
EKFEPAVPPE TMYIPDEERE QPDHKEEPKV SEVGVPEGWV LQVASYRHET HAKETRDKLI
AEGFSAYTKN VETSKGVMTR LYVGPKLDKT SLLDDKKSID KKYGVDTILL RYEP