| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2072 |
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| Symbol | |
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| ID | 3967456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2651649 |
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| End bp | 2653163 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921162 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_527544 |
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| Protein GI | 90021717 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.729582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAA TAGTGGGTAT AGTTGGTAAG AGCGATGTGA ACGTAGCGCT GTACGACGCG
TTAACGATGC TACAACATCG TGGCCAGGAT GCCGCAGGAA TTATGACTTG CCATAACGGC
AAATTGGCTC AACAAAAGGC TGTTGGCTTA GTAAAAGACG TGTTTCGTAC GCGTCATATG
CAGCGCCTAG TGGGCAACAT GGGTATTGGG CATGTGCGCT ATCCAACGGC AGGCAGCTCT
GGCCCAGCTT TGGCGCAGCC GTTTTACGTT AACTCACCAT ACGGAATTGC CTTGGCGCAT
AACGGTAACC TTACTAATAC CGAGAAAGTT AGCGAAGACT TGTTTAAAGA AGATCTACGT
CATGTAAACA CAGAGTCCGA TTCTGAAGTT TTACTTAACG TTTTTGCTCA CGAATTGCAG
CTTCAAGGTA AATTGCGACC TGCACCAGAA GATATCTTTA ATGCCGTTGC CAGAGTGCAT
AAGCGCATTC GCGGTGGCTA TGCGGTTGTA TCTATGATTG CAAGCTACGG CGTCGTAGCT
TTCCGCGACC CCCACGGTAT TCGTCCGCTG GTATTCGGTG AGCGTATTAC CGATAAAGGC
ACCGAGTATA TGATCGCCTC AGAGAGTGTT TCGCTGGATG TGCTGGGCTT TCGCTTAATC
CGCGATGTTG CACCGGGCGA GGCCATTTTT GTAACGGTTG ATGGCGAACT GCATACACGT
CAATGCGCCG AAAACCCCAG TTTGCGCCCG TGTATATTCG AACACGTGTA CTTTGCTCGT
CCAGATTCCA TTATGGATGG CGTATCTGTA TATAAGTCTC GCTTGCGTCA GGGTGAGAAA
CTAGCAGAGA AAATTTTGCG TGAAACGCCT AATCACGACA TAGATGTGGT TATTCCTATC
CCAGATAGCA GCCGTGTTGC TGGGCAAGCA TTAGCTCAAA ATTTAGGCGT TAAGTTCCGT
GAAGGCTTGG TTAAAAACCG CTATATTGGT CGTACTTTTA TTATGCCGGG CCAGCAGCAG
CGTAAGAAAT CAGTGCGTCA AAAGTTGAAC GTAATTGATT TGGAGTTCCG CGGTAAAAAT
GTACTGTTAG TAGATGACTC CATAGTACGT GGCACCACTT GCCAGCAAAT AATCCAAATG
GCGCGTGATG CAGGTGCGGC CAAAGTGTAT TTTGCTTCTG CGGCACCAGC TGTGAAGTAC
CCTAATGTTT ATGGTATTGA TATGCCAACC GCCGCAGAGC TTATTGCTCA CGGTCGTACA
GAAGAAGAAG TGTGCAAGGA GATTGGCGCC GACTGGCTAA TTTACCAAGA TTTAGAAGAC
TTAATCGCCG CTTCTAGCGA GGGTAGCCCA GACGTTACCC AGTTTGAATG TGCTGTATTT
AATGGCAACT ACGTAACTGG GGATGTAACC CCCGAGTATC TTAAAAAGTT GGAAGATCGC
CGCAACGACT CATCAAAAAT GCGGGATCAA AGCCAGTCTA ACAATGCCAT GGTGGGTATT
CACAACGACG GTTAA
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| Protein sequence | MCGIVGIVGK SDVNVALYDA LTMLQHRGQD AAGIMTCHNG KLAQQKAVGL VKDVFRTRHM
QRLVGNMGIG HVRYPTAGSS GPALAQPFYV NSPYGIALAH NGNLTNTEKV SEDLFKEDLR
HVNTESDSEV LLNVFAHELQ LQGKLRPAPE DIFNAVARVH KRIRGGYAVV SMIASYGVVA
FRDPHGIRPL VFGERITDKG TEYMIASESV SLDVLGFRLI RDVAPGEAIF VTVDGELHTR
QCAENPSLRP CIFEHVYFAR PDSIMDGVSV YKSRLRQGEK LAEKILRETP NHDIDVVIPI
PDSSRVAGQA LAQNLGVKFR EGLVKNRYIG RTFIMPGQQQ RKKSVRQKLN VIDLEFRGKN
VLLVDDSIVR GTTCQQIIQM ARDAGAAKVY FASAAPAVKY PNVYGIDMPT AAELIAHGRT
EEEVCKEIGA DWLIYQDLED LIAASSEGSP DVTQFECAVF NGNYVTGDVT PEYLKKLEDR
RNDSSKMRDQ SQSNNAMVGI HNDG
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