| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2071 |
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| Symbol | |
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| ID | 3967455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2650350 |
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| End bp | 2651543 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921161 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_527543 |
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| Protein GI | 90021716 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.667467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.823205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA ATCAGGACGA CAATTTAGCA GGCTTGGCGC TCGATACTCT AGCTATTCGT
GCGGGTCACC ATCGTACCCA CGAGGGTGAG CACAGCGAAC CTATTTTCAC TACTTCTAGC
TATGTATTCG AATCTGCAGC ACAAGCTGCT GCGCGCTTTG GTGGTTCAGA GCCTGGCAAT
GTGTATTCGC GCTACACCAA CCCAACCGTA CGCTTATTCG AAGAGCGCAT TGCCGCGCTA
GAAGGTGCAG AAGACGGTAT AGCAACCGCG TCGGGGATGG CCGCAATTTT AAGTACTTGC
ATGGCCCTGC TTGAAGCCGG CGATAAAGTT GTGTGTTCTC GCAGTGTTTT TGGTACCACA
ACGGTGCTGT TTACCAAATA TATGCAGAAA TTTGGTATAG AGGTTGTAAT GGTGCCACTC
ACAAATCTAG ATGCTTGGCG CGATGCCGTT TGCGAAAAAA CCAAATTGCT ATTCGTGGAA
ACGCCTTCAA ACCCTTTGTG TGATGTGGCA GATATAGCTG CGTTGGCCGA AATAGCCCAC
AGTAAAGACG CTTTGCTGGT AGTCGATAAC TGTTTTTGTT CGCCCGCGCT ACAAAAGCCT
TTGGCATTAG GCGCCGATTT GGTTGTGCAT TCGGCAACTA AGTACCTAGA CGGGCAGGGT
AGATGCTTGG GGGGAGCGGT AGTTGGCCCT GCAGAGCCCA TAGATTTAAT TCGCGGCTTT
ATTCGCAGTT GTGGCCCCTC TATGAGCCCA TTTAACGCGT GGGTTTTCGC GAAGGGTTTA
GAAACATTGC GCTTGCGTAT GGAGGCTCAT TCTAAAAGCG CTTTGGAACT AGCGCTATGG
TTGCAGGCTA ATCCTGCCGT AGAGAAAGTG TTTTACGCGG GTTTGCCAGA GCACCCAGGG
CATGCACTTG CCGCCAAGCA GCAAAGCGCA TTTGGTGGCG TGTTGTCGTT TAGAGTAAAA
GGTGGGCAAG CTGAGGCGTG GAAGGTTATA GATAGCACAA AATTCTTATC TATTACTGCC
AATTTAGGCG ATGCAAAAAC CACTATTTGC CATCCTGCCA CCACGACTCA TGGCCGTTTA
TCGGATCAAG AAAAAGTAGA AGCGGGAATC ACGCAAAACT TAATTCGTGT GGCTGTAGGC
TTAGAGGATA TCGACGATAT CAAAGCCGAT CTAGCGAGAG GTTTGGGCGC CTAG
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| Protein sequence | MTDNQDDNLA GLALDTLAIR AGHHRTHEGE HSEPIFTTSS YVFESAAQAA ARFGGSEPGN
VYSRYTNPTV RLFEERIAAL EGAEDGIATA SGMAAILSTC MALLEAGDKV VCSRSVFGTT
TVLFTKYMQK FGIEVVMVPL TNLDAWRDAV CEKTKLLFVE TPSNPLCDVA DIAALAEIAH
SKDALLVVDN CFCSPALQKP LALGADLVVH SATKYLDGQG RCLGGAVVGP AEPIDLIRGF
IRSCGPSMSP FNAWVFAKGL ETLRLRMEAH SKSALELALW LQANPAVEKV FYAGLPEHPG
HALAAKQQSA FGGVLSFRVK GGQAEAWKVI DSTKFLSITA NLGDAKTTIC HPATTTHGRL
SDQEKVEAGI TQNLIRVAVG LEDIDDIKAD LARGLGA
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