Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2067 |
Symbol | |
ID | 3967451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2645269 |
End bp | 2647320 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921157 |
Product | hypothetical protein |
Protein accession | YP_527539 |
Protein GI | 90021712 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.312074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.672104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAGCC AAATAGCCAT TGTTAAAAAC CAAATATCTC GCGACGCATT AGCGTGGTGC TTGGCAGCAC AAAGTATTTG TATTCTACCT TTGTTTTTCT ATTTTCCATT TTGGGTGCCG ATTTTGTGGT TGGTTGCCGC AGCGTGGCGA GTGCAAATTT ACCGCGGCCA CTGGGGTTAC CCACCTTCTT TTGTGAAACT TCTTTTAGGG CTTAGTTGTA TTGCTGGGCT TTGGGTTACT TATCGAGGTG GGTTTGGGGT AGAGCCGGTT GTTGCATTTT TAGTGTGCGC ATTTGTTTTA AAACTATTAG AAGCGCGCAC TAAAAAAGAT GTGGTTATCG TTTTATACGT TTGTTTTGTG GCTGTAGCTG CCCAGTTACT TTTTAATCAA ACTATTATTG CCGCTTTCTA TGCCATTATT TCGTTAGTTG TAATAATTGC AGCATTTACT GCAGTGTTTA GCCTTGTGGC AAACCGTATT AAACACAGGC TTTTTTATGC CAGCAAATTA ACCTTGCAGG CGCTACCTTT AGCCGTTGTG TTATTTCTTG TGTTGCCAAG GTTGGGGCAG TTATGGGCGG TGCCATTAAA TAATGCTAGT GGCACAACTG GGTTCAGTGA CTCGATGGCC CCTGGTGATA TTAGCAATTT GATTCGCTCA AGCGCGGTCG CTTTTCGTGC TTCGTTTACT AGTAGTAACG AAGATGTTGC CGAACCTGTT ATACCCAAAC AGCAAGATTT ATATTGGCGC GGTTTAGTGC TGGAAGATTA CGACGGTCGC CGTTGGAAGC GAAACCGGTA TCAGCAGGCT GCAGATTTCG CAAGATCCTC AAACAAAGAG GTAACGAGTG AGGTTGTAAC CGCAGGCGAA TATGTAGAAT ATTCTATTTT AATGGAACCC CACCAGCAGC GTTGGTTGTT TACCCTTATG GCTCCAGAGG TGCTATTAAA TAGCACGGTA AGTATAGGTT TTAAACCTCA GGCATTGCTT TCCGCTAATC TACCAGTAAC TCAGCGTATT CAATACCAAA TCCGATCCGC TCAAAAATAT AGTTTTCAAA CAGAAGGCTT AAGGCGGGAT GAGCTTAAAC GATCTCTTCA GGTGCCGGAT GAGCTAAACC CTCGAACTAA AGAATTGGTT GAAAGTTGGT TGGCAAGTGG GTTAACTCAG CAACAAATTA TAGAAAAAGC CCTGGATTTA TATAGAGAAA GTTTTTACTA CACGTTAAAC CCACCGCCAT TAGGCAGTGA TGCGATTGAT GAGTTTTTGT TTATAACGCG CCGTGGTTTT TGTGAGCATT TTAGTAGTAG CTTTACCTAT ATGATGCGCT TGGCCAATAT TCCCGCGCGC GTAGTGGTTG GTTATCAGGG GGGCGAGCAA AATAGCATAG AAAACTATTT ACTTGTGCGG CAATCAGATG CGCACGCGTG GGCTGAGGTT TGGTTAGAAG GGAAAGGCTG GCAGCGAATT GACCCCACCC ATGTGGTCGC TCCAAATCGT ATAGAGCAAG GCCTTTTTAA TTCTGTAGAA GAAAGTGAGG CCGCGCAACT TGAGGGCCGC TTTGTTAAGC AGTTTGCGCT ATTGAATAGA CTGCAAATGC GATGGGATTC TATAAATTAC TTATGGCATT CTCAGGTTTT GGCCTACGAC AGCAATGCTC AAAAAAGTTT GTTTAAGCGC TTATTGGGTG GCACGGAATA TTGGCGTATA GCCCTAGCAC TATTTGGCAG TGTGGCAGTG TTGTTATGTA TGTATTTTAT TGCTCCCATG CTGCAAAAGG GGGCTAGTCA GCCTGCGGAA GTGAAGCTGT TCAATATCTT TGAAAAAAAG CTTTGTAAAT TGGGGTATAC ACGTTTAAAA GGTGAGACTG CGGCGCAATT TGTTGAGCGC ATTGCAAAGG CTAACCCCGA GTTGGCCGAT CCATTGCTCA AAGTGCGGGA TTCATTTTAT GCTGCGGCCT ATCAAAGCTC GGCAGAAAAT ATCGCTGTTG GAGTGAAGCG GCTTGCAGCA GTGCTGAAGG TATTTCCCTA CAGTAAGGTG AGCCCGCCAT AA
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Protein sequence | MTSQIAIVKN QISRDALAWC LAAQSICILP LFFYFPFWVP ILWLVAAAWR VQIYRGHWGY PPSFVKLLLG LSCIAGLWVT YRGGFGVEPV VAFLVCAFVL KLLEARTKKD VVIVLYVCFV AVAAQLLFNQ TIIAAFYAII SLVVIIAAFT AVFSLVANRI KHRLFYASKL TLQALPLAVV LFLVLPRLGQ LWAVPLNNAS GTTGFSDSMA PGDISNLIRS SAVAFRASFT SSNEDVAEPV IPKQQDLYWR GLVLEDYDGR RWKRNRYQQA ADFARSSNKE VTSEVVTAGE YVEYSILMEP HQQRWLFTLM APEVLLNSTV SIGFKPQALL SANLPVTQRI QYQIRSAQKY SFQTEGLRRD ELKRSLQVPD ELNPRTKELV ESWLASGLTQ QQIIEKALDL YRESFYYTLN PPPLGSDAID EFLFITRRGF CEHFSSSFTY MMRLANIPAR VVVGYQGGEQ NSIENYLLVR QSDAHAWAEV WLEGKGWQRI DPTHVVAPNR IEQGLFNSVE ESEAAQLEGR FVKQFALLNR LQMRWDSINY LWHSQVLAYD SNAQKSLFKR LLGGTEYWRI ALALFGSVAV LLCMYFIAPM LQKGASQPAE VKLFNIFEKK LCKLGYTRLK GETAAQFVER IAKANPELAD PLLKVRDSFY AAAYQSSAEN IAVGVKRLAA VLKVFPYSKV SPP
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