Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2066 |
Symbol | |
ID | 3967450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2644754 |
End bp | 2645239 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921156 |
Product | ATP-binding region, ATPase-like |
Protein accession | YP_527538 |
Protein GI | 90021711 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000294793 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.545491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTATTAC GAAACAGAAA AAAGTTTGTT CTGTATGTTT CGGCCCTGCT TATTATTACC GGTGTGAGCG GTGCCGTTCA CTCGCAAGGC GCGATAGTAA AGTGGGTGGA TGAAAACGGT AAGGTTCACT ACGGGGATAG ACCACCTAAA GATAAGAATA TTCAGGTTGA AACGATTCAG CGTGATGCTT TGGAATTACA AGAAGAAGCC GAAGCCGCGG CAGCCGCAGA AGTCGAGGCA GAGCAAGTTG AAGAACCCGA GTGGGATTCT GAAGCAGAAA TAGCGCGTAT TAAGCGTGAA GCAGGGATAT CACAAGGCGG GAGTGGTGAC TCAATCGAAA CTCGAGATCA GTGTTTTGCC GCTTATCCTG CCCCGCCTTT GAAGCGCACC GCGCGAGGGT TGAGGCAAGC AGACTCGGCT GCTAGCGGTA GTGAGTTAGA TGAATGCTTA AATAATGTAT GCAACTATTA CGATGATTGT GGTTAA
|
Protein sequence | MVLRNRKKFV LYVSALLIIT GVSGAVHSQG AIVKWVDENG KVHYGDRPPK DKNIQVETIQ RDALELQEEA EAAAAAEVEA EQVEEPEWDS EAEIARIKRE AGISQGGSGD SIETRDQCFA AYPAPPLKRT ARGLRQADSA ASGSELDECL NNVCNYYDDC G
|
| |