| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2064 |
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| Symbol | |
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| ID | 3967448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2641957 |
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| End bp | 2643051 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921154 |
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| Product | hypothetical protein |
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| Protein accession | YP_527536 |
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| Protein GI | 90021709 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00393707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.614114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTTAT ACGACGTATA TATCATTAAC GTATTGGACT CAGAGGAGCA GGTAGCAAAG
GCGGCCGCGC TATTAGCAGC GAAATTTAGG CTTACACCGG AGCAGGCTCA AAACCTGCAA
AATAAGAAAC GAGCAATAAT TAAAAGGGCG GTAGACGAAG CTACGGCAAA AAAACTAGAA
GCGGCTATTG TTGATTGTGG CTTACAAGCA GAACTTGTAG ACGATTCTAT TGTGGTGGAA
TTAGAGCTAG CGGACAATCT ACCCCAAGCG AATGGTGAAT CAAAACACGC GAGTAGCGAT
TCAGCAGGTA AGCACGACAC CGCCGATAAT ATCTATCAAG CACCGGCTGC CCCAGTAGGT
AAACAAGTTT TCTGTCGCCA ATGCGGTAGC CAAATGCCGG TTGAGCAGCG AGTCTGCATA
AATTGTGGGG CGACAATGGC AACTGGTACT GGGCGGAGCA AAGTTGTTGC AGGCTTTCTG
GCGTTTTTCC TCGGTGGATT TGGTGTGCAC CGTTTTTATC TGGGGCAGTG GTGGGGTATT
TTTTATATAC CATTCTATTT TATTTTCTTC TTATCGAGCT TTATTTCGCT GGTGGAAGCG
ATTTATTTCT GGGCCTGCTC GAAGGAGCGC TGGGATGAAA AGTATGGTGA TAAACCAGCG
AGTTCCGGTT TGGTTATTGC GCTTATTGCC ATAATCCCCA TTATTGCGGT TGTAGGTATT
TTAGCTGCGA TTGCTTTACC TGCTTATCAA GATTACACAA TTCGAGCAAA AGTAGCTGGT
AGTTTGGCGG AAGCTCGCGC GTGGCAAGTG GCTGTCGAAG AGACTGCCGT TTCATCTAAT
TTTGTTCCAA ATAGCAACTT AGATGCAGGA ATAAACCTAA AGGCGACTAG TCCGCACTTA
AATAGCATTA AAGTAGTTGA GGGCGGTGAA ATTGAGCTTT TATTTAACCC GTTTACAGCA
AACCAAGAGT CTCATTCAAT TACGCTAACG CCCCAGTTTA ATACGCGAAA CGGTAAAATC
TTTTCCGCTA GCTGGGATTG TAGGGGAGGA TCGCTGCCTA ATATGTATCG TCCTGTGGCA
TGCCGTAAGA ATTAG
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| Protein sequence | MALYDVYIIN VLDSEEQVAK AAALLAAKFR LTPEQAQNLQ NKKRAIIKRA VDEATAKKLE
AAIVDCGLQA ELVDDSIVVE LELADNLPQA NGESKHASSD SAGKHDTADN IYQAPAAPVG
KQVFCRQCGS QMPVEQRVCI NCGATMATGT GRSKVVAGFL AFFLGGFGVH RFYLGQWWGI
FYIPFYFIFF LSSFISLVEA IYFWACSKER WDEKYGDKPA SSGLVIALIA IIPIIAVVGI
LAAIALPAYQ DYTIRAKVAG SLAEARAWQV AVEETAVSSN FVPNSNLDAG INLKATSPHL
NSIKVVEGGE IELLFNPFTA NQESHSITLT PQFNTRNGKI FSASWDCRGG SLPNMYRPVA
CRKN
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