| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2059 |
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| Symbol | |
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| ID | 3967443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2638327 |
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| End bp | 2639412 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921149 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_527531 |
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| Protein GI | 90021704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.46452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCCGCCG CCCTTGCTAA AGCAATTGAA CGACGCTGGT ATTCTAGACC CGGTATTCTT
TGGTTGCTTT ACCCTCTAGC TTTACTCTTT CGTTTACTCT CCTATTTTCG GCGTCGCTCG
CAAACGCAAT CAAGTGTCAA ATTTGCTGTG CCGGTATGTA TTGTGGGTAA TATAGCGATA
GGCGGTACAG GTAAAACTCC AACCATTATT GCACTTGTTC ATGCGCTTGC AGAGCAGGGT
ATTACTGCAG GTGTAGTAGC ACGAGGTTAT GGTGCGAGCT TAGCTAAAGA TGAGGTGAGA
GTGCTAGATG CAAACGCCAC CGCTGCGATG GTAGGGGATG AGCCGTTATT AATTTACAAG
CGTACCGGCT GTGTTGTGGC TGTTGGGTCG AATCGTGTCG CTGCTTGTGA GACGCTACTA
AAGAGCCACG CAGTAGATGT AATTCTTAGC GACGATGGTA TGCAGCACTA TAAATTAGGG
CGAGATTTAG AGCTGGCACT GGTGGATGGT GAGCGTGTAT TTGGTAATGG TCAGCTATTG
CCCGTTGGGC CTTTACGTGA GCACCCTAAG CGCTTGCAAA GCGTTAACTG GCTACTTGTA
AATGGCGGTA GCGCCGAACA TGTTAATGCT AGATTGCAAG CCTTGGAGGC GATCAATGCC
GCTGAGTTAT CTAGCAAACC AAACAAATTA AATAAAACTC CAGCACCTGT ATTTGCCCAA
TTAGAAGCGG TAAAGCTTGT TAACCTAGCT ACTGGTAAAA CTTTGCTATT GCAGAATATT
ACAGAGTTAG GGGCTTTTGT TGCGGTGGCG GGTATTGGCA ACCCAGCTCG TTTTTTTAAA
ACGTTACAAT CTACCGGTAT TACAGGTTTC GATACGTTTT CTTACCCAGA TCATCATAAA
TTTACAAGTG CCGACTTCCG CCAGTTTGAT AACAAAGCAA TCGTAATGAC CGAAAAAGAC
GCCGTAAAAT GCACACCTTT TGCAACAGAT GCAATGTGGT ATGTGCCTGT AGACCTTAAA
TTGCCACAAA CGTTTATTGC CGATTTTTGC GCACAAATAC GCAAAGTTAT TGCCCTCTAT
AATTAA
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| Protein sequence | MSAALAKAIE RRWYSRPGIL WLLYPLALLF RLLSYFRRRS QTQSSVKFAV PVCIVGNIAI
GGTGKTPTII ALVHALAEQG ITAGVVARGY GASLAKDEVR VLDANATAAM VGDEPLLIYK
RTGCVVAVGS NRVAACETLL KSHAVDVILS DDGMQHYKLG RDLELALVDG ERVFGNGQLL
PVGPLREHPK RLQSVNWLLV NGGSAEHVNA RLQALEAINA AELSSKPNKL NKTPAPVFAQ
LEAVKLVNLA TGKTLLLQNI TELGAFVAVA GIGNPARFFK TLQSTGITGF DTFSYPDHHK
FTSADFRQFD NKAIVMTEKD AVKCTPFATD AMWYVPVDLK LPQTFIADFC AQIRKVIALY
N
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