| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2058 |
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| Symbol | |
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| ID | 3967442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2637538 |
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| End bp | 2638305 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921148 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_527530 |
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| Protein GI | 90021703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.307895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTTA TAGTTGTTAT TCCCGCTCGT TTTGCTTCTT CACGCTTGCC GGGTAAACCG
CTTGCAGATA TTGCAGGCAA ACCAATGATT CAATGGGTGT ACGAGCGCGC CAAGCTAAGT
GATGCCAGCA AAGTTATCGT AGCCACCGAT AACCAACAAG TTTTTGATAC CGTAAAAGAA
TTTGGTGGCG AAGTGCTAAT GACATCGCCA AAGCACGAAT CTGGTACAGA TCGACTGCAA
GAAGTTGCGC AACAATTAGG CTTGGCTAAA GACGAAATAA TTGTAAATGT GCAGGGCGAT
GAGCCACTTA TTCCGCCCGC GGTTATTAAT CAGGTAGCAG CTAATATTCA AGGTAATAGT
TGGGCAAGTG CGGCAACCCT ATCTGAGCCT TTGGTAGAGA GTGAAATGGT GTTTGACCCC
AATGCCGTTA AGGTGGTGTC GGATGTCAAT GGTGCTGCGC TTTATTTTTC CCGTGCGCCA
ATTCCTTGGT ATCGCGACGA ATATCAGCAA CCAGTTTCGC AAGTGGCACC ACGTACAGAT
GGTTTGGTTC AGCGTCATAT TGGCATCTAT GCCTATAAAG TAAACTTGCT AAACCAATTC
GTGCAGTGGC CAATGTCTGC TTTGGAAGCT GTAGAGAAGT TGGAGCAGTT GCGTATACTT
TCTAACGGCA AAAAAATACA TATAGCTCCA TCGTGCGAAC TAGTACCCGG TGGGGTGGAT
ACGCAAGCTG ATTTAGATCG TGTACGTGCA AAGCTAAAAA GCTCGTAA
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| Protein sequence | MNFIVVIPAR FASSRLPGKP LADIAGKPMI QWVYERAKLS DASKVIVATD NQQVFDTVKE
FGGEVLMTSP KHESGTDRLQ EVAQQLGLAK DEIIVNVQGD EPLIPPAVIN QVAANIQGNS
WASAATLSEP LVESEMVFDP NAVKVVSDVN GAALYFSRAP IPWYRDEYQQ PVSQVAPRTD
GLVQRHIGIY AYKVNLLNQF VQWPMSALEA VEKLEQLRIL SNGKKIHIAP SCELVPGGVD
TQADLDRVRA KLKSS
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