| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2048 |
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| Symbol | |
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| ID | 3967407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2584100 |
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| End bp | 2584894 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637921136 |
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| Product | tRNA pseudouridine synthase |
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| Protein accession | YP_527520 |
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| Protein GI | 90021693 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.970717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.747011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGA AATTGAAATT AACAGTTAGC AGCTTAGTAA TAGCGCTTGC GTTGACTGGG
TGCGGCGAGT CTGAGAATAA ATCTAGCTTA GTGAAAGATG AAAAATTTGA AGCTTACCTA
AACTTTAAGC GCATTCCTCT CACAGATGAA AAAAGAGTTG CTAGCGCTCT TGTGGTGTAC
AACGAACGCG AAGCTATAAG CAAAGCAATT GAGAAATCCG ACTTGCTAGA TAAATCTTTA
ATTGATGTAG AAGTGGCCGA GTTCAAAAAG CAAATGCTTA TTAGCCGTTA CTTTGAAGCA
TATATTAAAA AGAACGTAAC ACCTGAAGCT ATAAAAAATT ACTACAACAA CAATCAGGAT
GAGTATCAAA ATAAAAAAAT CCACGTGGCA CATATTTTAT TTCGTACAAA CGGGCGTATG
AGTGATGAAG AAAAGAATGC TCGTTTGTTA AAAGCCAAAG AGGCCCATGC TCGTTTGCAA
CAAAACGAAA AATTTGAAGA TTTGGCCAAA GAATACTCAG ATGACAAACT TTCGGCTCAA
AAGGGCGGCG ACTTAGGTTG GTTAGATGAA GGCAGTATCG ACCCTGTTTT CTCGCGCACC
GTTTTTGCAA TGGATGCCGG TGCAGTTTCT GAGCCATTCG TTACTAGCTA CGGTTACCAT
ATAGTTAAGG TAATTGAAGC GGCTAAAACA ACGACTAAAC CATTTGATGC TGTAAAAGGT
GATATTGCTT ACAAATTAAA AGAGCAAGCT AAACAAGCAG AAATGAATCG TTTAAAAGAG
CAAGCTAAAA AGTAG
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| Protein sequence | MKLKLKLTVS SLVIALALTG CGESENKSSL VKDEKFEAYL NFKRIPLTDE KRVASALVVY
NEREAISKAI EKSDLLDKSL IDVEVAEFKK QMLISRYFEA YIKKNVTPEA IKNYYNNNQD
EYQNKKIHVA HILFRTNGRM SDEEKNARLL KAKEAHARLQ QNEKFEDLAK EYSDDKLSAQ
KGGDLGWLDE GSIDPVFSRT VFAMDAGAVS EPFVTSYGYH IVKVIEAAKT TTKPFDAVKG
DIAYKLKEQA KQAEMNRLKE QAKK
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