| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2037 |
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| Symbol | |
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| ID | 3967396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2564477 |
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| End bp | 2565088 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921125 |
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| Product | putative haloacid dehalogenase-like hydrolase |
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| Protein accession | YP_527509 |
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| Protein GI | 90021682 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGCAC GAGTGACGAC TTTGTTGTTT GACTTAGGTG GTGTGCTAAT TGAATTAGAT
GGCAGCCCCC TTAAGGATCA TTGGCTAGAA ACGCCTGTTA GCTATGCCGA TGCTTGGCTG
CGTTGGGGGC AGTCGCCGGT AGTCAAAGCC TTTGAAACAG GCATTATGAC CGCCGATGAA
TTTGTAGAGC GTATTATCGC CGAGCAAGGG CTGTTGATTT CTGCCGAGCA ATTTAAGCAG
GAATTTACTC GTTGGCCAAA GGGCTTGTTT ACTGGCGCGA GGGAATTATT GTTGAACTTG
CGAAAAGACT ACACATTAGG CTTTTACTCC AATACCAACG AGCTGCATTT ACCCTGGTTA
ACAAAAGATT TAGGTCTAGA AAGCTTATTT GACTATTGCT TTGCGTCGTA TGAGATTGGT
TACTTCAAAC CAGATACACA TGGCTTTGCC TACGCGTCCG ATAAGATGGG GGCAGACCCG
CGCAGTATTT TGTTTATAGA CGATAATATG ATCAACGTGG AAGGCGCGCG CAAAGCGGGT
TTGCATGCAG AAAAAGCATT TGAGCTCGAA GAAGTGAAAG CGGTACTGCA TAAATACGGC
TGTACGGGTT AA
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| Protein sequence | MDARVTTLLF DLGGVLIELD GSPLKDHWLE TPVSYADAWL RWGQSPVVKA FETGIMTADE
FVERIIAEQG LLISAEQFKQ EFTRWPKGLF TGARELLLNL RKDYTLGFYS NTNELHLPWL
TKDLGLESLF DYCFASYEIG YFKPDTHGFA YASDKMGADP RSILFIDDNM INVEGARKAG
LHAEKAFELE EVKAVLHKYG CTG
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