| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2032 |
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| Symbol | |
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| ID | 3967295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2560835 |
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| End bp | 2561740 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921120 |
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| Product | SSU ribosomal protein S6P modification protein |
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| Protein accession | YP_527504 |
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| Protein GI | 90021677 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000147156 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATCG CCGTCCTATC ACGCAACCCT AACCTCTATT CTACTCGCCG CTTAAAAGAA
GCCGGCGAGG CCCGTGGCCA CACAGTAGAT ATAATCGACA CACTGCATTG CTACATGGAT
ATCACCATGA GCCGACCCGC GGTGCGCTAC CACGGCGAAG AACTACCCTA CTATGACGCC
GTCATACCTC GCATTGGCGC GTCCATTACC TTTTACGGTA CGGCGGTAGT GCGTCAATTC
GAAATGATGG GCACATTCTG TGTAAACGAA TCTGTAGCTA TTAGCCGTTC GCGCGACAAA
TTGCGCTCGC TACAACTGCT ATCGCGCAAA GGTGTGGGCC TACCCCGTAC AGGTTTTGCC
AACCGTCCAG ACAAAATCAA AGACTTAATT AAGAATGTGG GCGGCGCCCC TTTAGTAATT
AAGTTACTAG AAGGTACACA AGGCATTGGC GTTGTATTAG CCGACACCAA CAAAACTGCA
GAGAGCATTC TAGAAGCCTT TATGGGGCTA AACGCCAACA TTTTGGTGCA GGAATACATT
AAAGAAGCTG GCGGTGCAGA TATACGCTGC TTTGTGGTGG GTAATAAAGT GGTTGCCGCT
ATGAAGCGTC AAGGCGCCGA AGGCGAGTTC CGCTCCAACC TTCATCGCGG CGGGTCCGCC
ACTTTAGTAA GATTGAGCAA AGAAGAACGA GCCACCGCCG TGAATGCAGC CAAAGTAATG
GGCTTGAATG TATGCGGCGT AGATATCTTA CAATCCAACA ACGGCCCCGT TGTTATGGAA
GTAAACTCCT CCCCGGGTTT AGAAGGCATA GAAAATGCTA CCAATAAAGA CGTAGCGGCA
TTGGTAATGG AATTTATAGA AGCCAACGCT AAACCCAACA ATACTAAAAC ACGCGGTAAA
GGCTAA
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| Protein sequence | MRIAVLSRNP NLYSTRRLKE AGEARGHTVD IIDTLHCYMD ITMSRPAVRY HGEELPYYDA
VIPRIGASIT FYGTAVVRQF EMMGTFCVNE SVAISRSRDK LRSLQLLSRK GVGLPRTGFA
NRPDKIKDLI KNVGGAPLVI KLLEGTQGIG VVLADTNKTA ESILEAFMGL NANILVQEYI
KEAGGADIRC FVVGNKVVAA MKRQGAEGEF RSNLHRGGSA TLVRLSKEER ATAVNAAKVM
GLNVCGVDIL QSNNGPVVME VNSSPGLEGI ENATNKDVAA LVMEFIEANA KPNNTKTRGK
G
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