| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2022 |
|---|
| Symbol | |
|---|
| ID | 3967285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2546432 |
|---|
| End bp | 2547316 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637921110 |
|---|
| Product | generic methyl-transferase |
|---|
| Protein accession | YP_527494 |
|---|
| Protein GI | 90021667 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTT CGATAAAAAA CTGCATAGGC AGTTTTGCGG ACACTTTGCG CAACCGCTGG
CAAATTCAAC CTCTGCAAAA TACCATGCTC GATTTGCATG AGTGGTTCAA GGGGCCTTAT
GGTGTGGCCT TGCTCGATGC GCAAAAACAG ACCATTGAGC ACGAGTTGGG CGGCTATTTT
GGGTACCACT TAATGCAGCT TAGCGTGCTA CCCGAGCACA AGTTTTACGA TTCCAGCAGA
ATAAACCACC GTTTTTCATT AAGCCCTTTA GCCAATGAAC ATGCCGAGAA TGCACAAGCC
TGCGCAGATA TGGAAAGCCT GCCACTGCCC GATGAGTGTA TTGATGTGTG TATATTGCAC
CACACCCTAG ATTTTGCAGC TAACCCCCAG CAGGTGCTAA AAGAGGCCGC ACGTGTAACC
GTGCCTAGGG GTTACATCAT TTTAATGGGG TTTAACCCTA CTAGCGTGTC TGGCTGTATT
AAGCCATTTG CGCATTTTGC GGGTAAAACG CCTATTTGGA AGCGCCAAAG CTTAAGGGTT
AGAAGGTTAA AAGATTGGTT GGCGTTTTTA GACTTTTCAA CGCTAGATGT TAAATACGGT
GCATACAGCG TACCCATAAA CAACGAAAAA TACTTACGTA ATACACGGCT AATAGAGCGC
AGTTTTGCTA AAACGAATCT GCCACTAGGG GGCACATATT GTATCTTTGC ACGCAAAGAT
AAGGTTGGAC TCACACCCAT AAAACCAGCG TGGGATAAAA CAACTAAGGG ATTAATGGAT
GTGGTGCCCT TGCCTAAACG AGCTATTAAT CCTGGCATGC GTCGGCACAG CGCAGATGTG
CTCCCTATGC GGCGCCGTAC CATCGCACCA AAATACTTTC CTTAA
|
|---|
| Protein sequence | MSFSIKNCIG SFADTLRNRW QIQPLQNTML DLHEWFKGPY GVALLDAQKQ TIEHELGGYF
GYHLMQLSVL PEHKFYDSSR INHRFSLSPL ANEHAENAQA CADMESLPLP DECIDVCILH
HTLDFAANPQ QVLKEAARVT VPRGYIILMG FNPTSVSGCI KPFAHFAGKT PIWKRQSLRV
RRLKDWLAFL DFSTLDVKYG AYSVPINNEK YLRNTRLIER SFAKTNLPLG GTYCIFARKD
KVGLTPIKPA WDKTTKGLMD VVPLPKRAIN PGMRRHSADV LPMRRRTIAP KYFP
|
|---|
| |