Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2014 |
Symbol | |
ID | 3967257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2537362 |
End bp | 2537859 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921102 |
Product | hypothetical protein |
Protein accession | YP_527486 |
Protein GI | 90021659 |
COG category | [S] Function unknown |
COG ID | [COG3749] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.320985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGC TAGTTAAGAA TGCTCAAGTT GTAGAACACA GCTGGGTACT AATTAGAACA GAAGAAGAAT TAGCTGCTGC AGATCTCACA AGCGGTCAAT GGCTTGTGCC TTACAGCGCT TATATCGCAA ACACAGAAGG CTACAAAGAT GCAGATCGAT TCGGCTTTTG GATAGCAAGT GATGTAGACA TAGAGCAAGT AAAAGCAGTG GTTAAAGATC GCAATATTAT TGCTATCGAC TTTCCTGTAT TTGCTGATGG TCGCGGCTTT TCACTTGCGC GTACTCTGCG AGAGCACACT GATTTTAGCG GTGAAATTCG CGCAGTTGGC AACTTCATTT TCGATCAGAT TTTCTACATG TCTCGTTGCG GCTTTGACGC ATTTGAGTTT GCAGAAGAAA CAGACGTTAA CAAAGCTTTA CCGTTTTTTA GCACGTTTAG CGAAAGCTAC CAAGCGGGTA CCGACGAGCC ACAACCACTG TTTCGTCGCA GAGCTTAG
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Protein sequence | MPKLVKNAQV VEHSWVLIRT EEELAAADLT SGQWLVPYSA YIANTEGYKD ADRFGFWIAS DVDIEQVKAV VKDRNIIAID FPVFADGRGF SLARTLREHT DFSGEIRAVG NFIFDQIFYM SRCGFDAFEF AEETDVNKAL PFFSTFSESY QAGTDEPQPL FRRRA
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