Gene Sde_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2014 
Symbol 
ID3967257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2537362 
End bp2537859 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content44% 
IMG OID637921102 
Producthypothetical protein 
Protein accessionYP_527486 
Protein GI90021659 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.320985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGC TAGTTAAGAA TGCTCAAGTT GTAGAACACA GCTGGGTACT AATTAGAACA 
GAAGAAGAAT TAGCTGCTGC AGATCTCACA AGCGGTCAAT GGCTTGTGCC TTACAGCGCT
TATATCGCAA ACACAGAAGG CTACAAAGAT GCAGATCGAT TCGGCTTTTG GATAGCAAGT
GATGTAGACA TAGAGCAAGT AAAAGCAGTG GTTAAAGATC GCAATATTAT TGCTATCGAC
TTTCCTGTAT TTGCTGATGG TCGCGGCTTT TCACTTGCGC GTACTCTGCG AGAGCACACT
GATTTTAGCG GTGAAATTCG CGCAGTTGGC AACTTCATTT TCGATCAGAT TTTCTACATG
TCTCGTTGCG GCTTTGACGC ATTTGAGTTT GCAGAAGAAA CAGACGTTAA CAAAGCTTTA
CCGTTTTTTA GCACGTTTAG CGAAAGCTAC CAAGCGGGTA CCGACGAGCC ACAACCACTG
TTTCGTCGCA GAGCTTAG
 
Protein sequence
MPKLVKNAQV VEHSWVLIRT EEELAAADLT SGQWLVPYSA YIANTEGYKD ADRFGFWIAS 
DVDIEQVKAV VKDRNIIAID FPVFADGRGF SLARTLREHT DFSGEIRAVG NFIFDQIFYM
SRCGFDAFEF AEETDVNKAL PFFSTFSESY QAGTDEPQPL FRRRA