| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2001 |
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| Symbol | |
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| ID | 3967244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2518404 |
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| End bp | 2519255 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921089 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_527473 |
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| Protein GI | 90021646 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.657953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAT CAATTTCTCA ATTGTTAGAC TTAGAGCTTT TAGATAACAA CCTATTTAGA
AGTCGCCACC ACAGGGAAAA TTTCAGAAAA ACGCTGTTTG GTGGTCAGGT GCTTAGCCAA
GCATTAATAG CCGCATACAA TACGGTTGAA AACCGTTTGC CGCACTCTTT GCACGCATAT
TTTTTGCGGC CTGGCACCAG CGAGTCGCCG GTTATTTACG ATGTGGAAAC CGTGCGAGAC
GGCCGAAGCT TAACCAGCCG CAGAGTGGTA GCAAGGCAAA ATGGCCGCCC TATTTTTAAT
ATGTCTACTT CGTTTCACAG CGAAGAGCCC GGTTTTTTTC ATCAACCTGC TATGCCCTCC
TCTATACCTA TGCCCGAGGA GCTACTTAAA ACCTGCTCAC CAAGCTCTGC AGAGGATCAC
CTACCGCCAC ATGATTGCGT ACCCAACCAA GCTGCTAGCC CCTTCGAGCT GCTGCCAATA
GACGGTAATC CATTTACCTC GCAAGAGTCT CTTGCCCCTA CCACTTACTT TTGGATGCGC
TCAACAGAAC CTCTGCCAGA AGCGCCTATT TATCACTATT GTGCACTAGC GTTCGCATCA
GATCTCGGCT TGCTGGCGAC TGCTCTCTTG CCCCATAAAG CAACCATTTT CGATAAGGGC
CTATTTGCCG CTAGCGTTGA CCATGCAGTT TGGTTTCATT CAGTAAACTT TAAAGCCGAC
GATTGGCTTT TGTGTGAATC ACACAGCCCT TGGGCTGGTT CTTCTAGAGG CTTTGCTAGA
GCGAGTGTAT TTACAAGAAA CGGCACTCTT GTAGCGTCTA CGGCACAGGA AGGCATTATT
CGAAAAGTGT AA
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| Protein sequence | MTASISQLLD LELLDNNLFR SRHHRENFRK TLFGGQVLSQ ALIAAYNTVE NRLPHSLHAY
FLRPGTSESP VIYDVETVRD GRSLTSRRVV ARQNGRPIFN MSTSFHSEEP GFFHQPAMPS
SIPMPEELLK TCSPSSAEDH LPPHDCVPNQ AASPFELLPI DGNPFTSQES LAPTTYFWMR
STEPLPEAPI YHYCALAFAS DLGLLATALL PHKATIFDKG LFAASVDHAV WFHSVNFKAD
DWLLCESHSP WAGSSRGFAR ASVFTRNGTL VASTAQEGII RKV
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