Gene Sde_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1997 
Symbol 
ID3967240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2513908 
End bp2514846 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content46% 
IMG OID637921085 
Productelectron transfer flavoprotein, alpha subunit 
Protein accessionYP_527469 
Protein GI90021642 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.11647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAT TAGTAATAGC AGAACACGAT AATAAAACAC TGCATCCTTC TACTTTGAAT 
GTAATTGCTG CAGCCAGTAA AGTTGGTGAC GATATAAGCG TTTTGGTTGC AGGCGCTAGC
GCTGCGGAAG TAGCCGATGC TGCCGCTAAA GTTGACGGTG TAAGTAAAGT ACTGCATGCA
GATAACGCTG CTTATCAATA CCAATTAGCA GAAAACGTCG CGCAGGTTGT AGTAAGCCTT
GCTAAAGCCA ATGGTTATAG TCATATACTT GCGCCCGCAA CCACAACAGG CAAAAACTTG
TTGCCACGCG TTGCCGCTTT ACTAGATGTT CAACAGCTAT CAGACGTGAT TGCCGTAGAA
AGTGAAGATA CTTTCAAGCG TCCAATCTAT GCAGGTAATG TTATTGCCAC CGTTAAAAGT
ATCGATGCAA CAAAAGTATT AACCGTAAGG GCAACAGCAT TCGATCCTGT AGCAAGTGAA
GGCGGAAGCG CATCAATAGA AGCCATTGCT GAAGTTAGTG AAGCCGGCCT TTCGAGCTTT
GAAAAAGAAG AGCTCGCCAA ATCTGACCGA CCAGAACTCA CCGCAGCGCG CGTTGTTATA
TCCGGTGGTA GAGGTATGCA AAACGGGGAA AACTTCGAAA TGCTGTATAC CCTAGCCGAT
AAGCTAGATG CAGCCGTAGG TGCTTCACGG GCAGCAGTAG ACGCAGGCTT TGTACCCAAC
GATATGCAAG TTGGCCAAAC AGGTAAAATT GTGGCCCCAG ATTTGTATAT AGCAGTGGGT
ATATCCGGTG CTATTCAACA TTTAGCAGGA ATGAAAGACT CTAAAGTGAT TGTAGCTATT
AACAAAGACG AAGACGCGCC TATTTTCCAG GTGGCCGATT ACGGCTTGGT AGCCGATCTT
TTTGATGTGA TTCCCGAGTT GAACGAAAAG CTAGCTTAA
 
Protein sequence
MAVLVIAEHD NKTLHPSTLN VIAAASKVGD DISVLVAGAS AAEVADAAAK VDGVSKVLHA 
DNAAYQYQLA ENVAQVVVSL AKANGYSHIL APATTTGKNL LPRVAALLDV QQLSDVIAVE
SEDTFKRPIY AGNVIATVKS IDATKVLTVR ATAFDPVASE GGSASIEAIA EVSEAGLSSF
EKEELAKSDR PELTAARVVI SGGRGMQNGE NFEMLYTLAD KLDAAVGASR AAVDAGFVPN
DMQVGQTGKI VAPDLYIAVG ISGAIQHLAG MKDSKVIVAI NKDEDAPIFQ VADYGLVADL
FDVIPELNEK LA