| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1984 |
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| Symbol | |
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| ID | 3967227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2493975 |
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| End bp | 2494850 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921072 |
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| Product | transglutaminase-like |
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| Protein accession | YP_527456 |
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| Protein GI | 90021629 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT ACAAAATTAT CCACCAAACA CAGTATGACT TTTCTGCATC GGTACAACTG
TTGCCCCACA CCCTTAGGCT TAGGCCGAGA GAAGGCCACG ACCAGCGTAT TGAGTCATCT
AGTTTAGACA TTAGCCCTAA CGCATCGCTT CGCTGGCATA GAGATGTCGA AAGCAATTCT
GTTTGTATAG CCAGCTTTAA CAGCAAGGTA AAGCAGTTAA ATATACAGAG CGATATAATT
ATTCAAAAAT ATGACTTATC GCCACACGAT TTTTTGTTAG AAAGCTATGC TGTGGAATAC
CCATTTAATT ATAGCGTCGA GGATAAAATT CTTCTCGCGC CCTATATGGA ACAAATTCAG
TATATTGATC AGCCCATGGT GAATAACTGG GTGAGACTGT TCTGGCCGCA AGGCAACACC
ATTCAAACAT TCGACTTACT ACTAAAGCTA AACCAAAACA TTTACCAATC TATAGTTTAC
TGTAAGCGCG AGGAAGAGGG TGTGCAATCG GCAGACACCA CATTGCAAAA TAAATCTGGG
TCTTGCCGAG ATTCCGCAAA TTTATTTATG AGTGCAGCGC GAAAACTCGG CTTTGCTACG
CGTTTTGTTA GTGGCTACAT ATACTCAAAT ACCGACATTG CCCAAGCTGG CTCTACTCAC
GCTTGGGCCG AAGTGTTTTT ACCTGGCGCG GGCTGGAAAG GCTTTGACCC TACGATGGGG
AGCATAGCCG GGCCAGAGCA TATTGCTGTA GCTGTATCGA GGCGACCAGA AGCGGTACCG
CCTATATCTG GTACCTTTTT TGGCCCGCCG GGTACCAATA TGACTGTAAA TGTTTGGGTA
ACTGATGCAA TAACACCTAC CGGAGCGCCA ATGTAA
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| Protein sequence | MKRYKIIHQT QYDFSASVQL LPHTLRLRPR EGHDQRIESS SLDISPNASL RWHRDVESNS
VCIASFNSKV KQLNIQSDII IQKYDLSPHD FLLESYAVEY PFNYSVEDKI LLAPYMEQIQ
YIDQPMVNNW VRLFWPQGNT IQTFDLLLKL NQNIYQSIVY CKREEEGVQS ADTTLQNKSG
SCRDSANLFM SAARKLGFAT RFVSGYIYSN TDIAQAGSTH AWAEVFLPGA GWKGFDPTMG
SIAGPEHIAV AVSRRPEAVP PISGTFFGPP GTNMTVNVWV TDAITPTGAP M
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