| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1976 |
|---|
| Symbol | |
|---|
| ID | 3967141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2485381 |
|---|
| End bp | 2485953 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637921064 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527448 |
|---|
| Protein GI | 90021621 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACGCA AGTACCTGCT GCAAGCAGCC CTGTTGTTAT CTGGCCTATT GTGTACCCCT
TTTAGCACCG CCGCAAACGC TCAAGAACAT GGCGCACATA CCCATGGCGA AGCAGATGTG
TTAATTATTC TTGAGAGCAC AAGCTTATTT ATTACGTTAG AGTCCCCCGC GGTTAATTTG
CTTGGGTTTG AACACGCCCC TCACACAAAC AAGCAAAAGC AATTAGCCAA AGAAGTTGTC
GCCAAATTAC AAAAAGCAGA ACACTTTTTC GCGATTACGC CTGCATGTGT ATTAAAAAAT
AACAGCGTAG ATTTCCCATT CGAACTAGAA AACACCAGTA CACATCACGT AAGTACTAAC
GGCAATCACA CAAGTAAAGA GCACCACCAC GATGTTAGCC TAAACGTGGA ATGGCAATGT
AAACGAACTA AAAAATTAGA AATAGATATT AAAATATTCG AAGAATTTAA AGGGTTTAAT
TCAATTACAG CCCAATGGAT TGCCTTTGAC CGCCAAAACG CAGCTAAGCT TAATAAACAT
AATTCCGTAG TCATACTCGA GCCTGCACAA TAA
|
|---|
| Protein sequence | MKRKYLLQAA LLLSGLLCTP FSTAANAQEH GAHTHGEADV LIILESTSLF ITLESPAVNL
LGFEHAPHTN KQKQLAKEVV AKLQKAEHFF AITPACVLKN NSVDFPFELE NTSTHHVSTN
GNHTSKEHHH DVSLNVEWQC KRTKKLEIDI KIFEEFKGFN SITAQWIAFD RQNAAKLNKH
NSVVILEPAQ
|
|---|
| |