| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1975 |
|---|
| Symbol | |
|---|
| ID | 3967140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2484319 |
|---|
| End bp | 2485329 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637921063 |
|---|
| Product | putative GTPase |
|---|
| Protein accession | YP_527447 |
|---|
| Protein GI | 90021620 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAA AGCTAGAAAA AATACAGGCA ATACCCACCA ATATTATCAC CGGTTTTTTG
GGCGTAGGTA AAACAACCGC TATTTTATCT TTATTAGCTA ACAAGCCTGA AGACGAGCGA
TGGGCAGTAT TAGTTAATGA GTTTGGAGAA ATAGGCATAG ATGGCAGTCT GCTACAAGGC
CAGCATTCAG AAAACAGCGG TTTATTTATT CGAGAGGTAC CAGGTGGCTG TATGTGCTGC
GCAGCAGGGT TGCCAATGCA AATTGCCCTG AATCAATTAC TTACTAAAGC AAAACCTCAG
AGGTTACTTA TAGAACCGAC AGGCTTGGGG CACCCAAAAG AAATATTACA AGTGCTTAGT
GCAGAGCATT ACAGAACCAT TCTAGATGTC CAAACCACAG TTACACTAGT AGATGCCCGC
AAAGTAAGCG ATAAACGCTA TACCAATCAC GATACGTTTA ATCAGCAAAT ACAAATAGCC
GATATTATTG TTGGCAATAA AAGCGACTTA TATCAAAGTA ACGAGAAAGA GCAGCTAGAA
AACTACGTAA AGCTGCAAGC TGGGCCAGAG ATAAAGGTTG TTTACGCCGA GCAGGGCCAA
CTTAATCCAT CGTTACTAAA GGGGGCCTCC AAGGCGGCCA AAAGGCTAAT ACAATCGAGC
AGCAATCACC ATCAAACCCT CACAAGCCCC GAAGAATTAA CTATTCCAGA GTGCGGGTAT
TTAAAAAGTG ACAACACAGG CGAAGGCTAC CGTAGTTCTG GCTGGCGTAT TTCCGCAGAG
AAAATATTCC ACAGGCAAGC CATATTTAAT TGCTTTGCAG GGTTGAACGT AGAGCGACTG
AAAGCTGTAC TCATTACAGA TGAAGGCGTA TTTGGCTACA ATTTAGTGGA CGATTCGCTA
AAAGAAGTGG TGCTTGATGA TTGCTTAGAA AGCCGAATAG AAATTATATG GAAAGAGGGC
GAAGATTCGG GTGCGGCTGA GGATTTTCCG TTCGGTTTGT TAATGGAATA A
|
|---|
| Protein sequence | MNTKLEKIQA IPTNIITGFL GVGKTTAILS LLANKPEDER WAVLVNEFGE IGIDGSLLQG
QHSENSGLFI REVPGGCMCC AAGLPMQIAL NQLLTKAKPQ RLLIEPTGLG HPKEILQVLS
AEHYRTILDV QTTVTLVDAR KVSDKRYTNH DTFNQQIQIA DIIVGNKSDL YQSNEKEQLE
NYVKLQAGPE IKVVYAEQGQ LNPSLLKGAS KAAKRLIQSS SNHHQTLTSP EELTIPECGY
LKSDNTGEGY RSSGWRISAE KIFHRQAIFN CFAGLNVERL KAVLITDEGV FGYNLVDDSL
KEVVLDDCLE SRIEIIWKEG EDSGAAEDFP FGLLME
|
|---|
| |