| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1972 |
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| Symbol | |
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| ID | 3967137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2481814 |
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| End bp | 2482557 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921060 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_527444 |
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| Protein GI | 90021617 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAA CAACTTCGCC CAATCCTACT ATCAATTGTA ATAGCAGCCT AGCTGTAGAA
ATGCACACTG TGCAGTTTAA GTACCATAAA ACTGCCAATC CTGTGTTGAG CATCCCAAAC
TGGTACTTAC ATGCAGGTGA AAAGGCGTTT ATTCAAGGCG CATCTGGCGC GGGTAAATCT
ACCTTTTTGA AGTTGCTATC AGGGCTTTTA GTGCCAACAC AGGGCGCCAT AAATGTATTG
GGGCAGCCTA TAAGCCAGCT AAAAGGGGCG AAGCGCGATA GGTTTCGTGC AAAGCATATT
GGCTTTATAT TCCAACAGTT TAATTTAATC CCCTACCTTT CAGTTAGAGA TAACATAGCC
GCAGCGTATT ATTTTTCTAA CAATAAAAGC TCATCTAAAA AAGATTTTGC TAACCGTATT
AATGAGCTAC TAAACACGCT GAGGTTGCCA TTAGATATTG CAGAACGCAA AACAAGCGCT
TTAAGTATTG GCCAACAGCA ACGCGTAGCA ATAGCACGTG CTTTAATTAA TAACCCCGAA
CTAATAATTG CCGACGAACC CACTTCAGCA TTAGATGCAG CAGCTCGTGA TAGTTTTATG
ACGCTACTAC TAGAATGTGT TGCAGAAAAT GAATCCACAC TTATTTTTGT AAGCCACGAC
AAAACACTAG CGCGTGGCTT CGACGAAATA GTCGACCTGC AAAACCTTAA TGAAATTCAA
AAGGGGGCCA GCCATGCTAA TTAA
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| Protein sequence | MPKTTSPNPT INCNSSLAVE MHTVQFKYHK TANPVLSIPN WYLHAGEKAF IQGASGAGKS
TFLKLLSGLL VPTQGAINVL GQPISQLKGA KRDRFRAKHI GFIFQQFNLI PYLSVRDNIA
AAYYFSNNKS SSKKDFANRI NELLNTLRLP LDIAERKTSA LSIGQQQRVA IARALINNPE
LIIADEPTSA LDAAARDSFM TLLLECVAEN ESTLIFVSHD KTLARGFDEI VDLQNLNEIQ
KGASHAN
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