| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1962 |
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| Symbol | |
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| ID | 3967127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2466265 |
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| End bp | 2467245 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921050 |
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| Product | AP endonuclease |
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| Protein accession | YP_527434 |
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| Protein GI | 90021607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA CAACACTACA AAGCACCACT GGGCTGCCCG TTCCGAATGA GTCAGATACC
ATTCGGAAAT ACATCACTGC TGCAACCTCT GACAACACAC GTAAAACCTA TCGTTCTGCC
ATCAAACAAT TTGAAAAATG GGGCGGTCGA TTACCGAGTG ATCCACAAAC ACTGATCCAA
TATTTACTCG CCAGGGCGCA AGCATCCAGT ATTCGAACCC TGGATTTACA CCTCACAGCA
ATCGGGCAAT GGCATCGCTA TCAGGGGATG GAAAATCCGG TGGATGCGCC CCTCGTGCGT
AAAGCAATGG AAGGGATACG CCGTACTCAT GGGCAACCGA AGCGTAAAGC CAAGGCCTTA
CGTCTGGAGC ATATCGGGCA AATGGTAGGT CACTTGCAGC AGCAGCCAAA CTCCAACAAA
CGAGCAAGGG ATCTGGCGCT GGTTTTGAGT GGATTTTTTG GCGCTTTCCG CCGTAGCGAG
TTAGTAGCTA TTGATATAGA TGATCTATTG TGGGAGCCCG AGGGTTTAAT TGTCAGAATG
CCGCATTCCA AAACCGATCA GGAATCCGCC GGTCAGATGC GCGCCCTCCC CTACGGCAAC
AAAGGGGTTT GTCCGGCCGC GGCAATCAAG AGCTGGATAA ATATAGCAAA CATCGAATCA
GGTCCACTGT TCCGCCCGAT CAACCGCTGG GATCAAATAA AGCAGAGACG TCTGGGTGCA
GGAGCGATCA ACGATCTTCT TAAAGCGCTT GGGGCTAACT GTGGTTTTGA TTTCGTTCCG
GACTTAAGCA GCCACAGCTT GCGTAGAGGG CTTTCAACGT CCGCAGCAAG AGAGCGTGTG
GATTTTGAAC TTATTAAAAA ACAGGGAGGG TGGAAAAGTG ACGCCACCGT TTGGGAATAT
ATTGAAGAGG GACAGTTGCT GACCAATAAC GCCACGCTGG TGTTAATGGA GAAACTGGCG
TTACACATGC GCAATGCATG A
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| Protein sequence | MKETTLQSTT GLPVPNESDT IRKYITAATS DNTRKTYRSA IKQFEKWGGR LPSDPQTLIQ
YLLARAQASS IRTLDLHLTA IGQWHRYQGM ENPVDAPLVR KAMEGIRRTH GQPKRKAKAL
RLEHIGQMVG HLQQQPNSNK RARDLALVLS GFFGAFRRSE LVAIDIDDLL WEPEGLIVRM
PHSKTDQESA GQMRALPYGN KGVCPAAAIK SWINIANIES GPLFRPINRW DQIKQRRLGA
GAINDLLKAL GANCGFDFVP DLSSHSLRRG LSTSAARERV DFELIKKQGG WKSDATVWEY
IEEGQLLTNN ATLVLMEKLA LHMRNA
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