| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1953 |
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| Symbol | |
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| ID | 3967059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2455600 |
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| End bp | 2457513 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921041 |
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| Product | high-affinity Fe2+/Pb2+ permease |
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| Protein accession | YP_527425 |
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| Protein GI | 90021598 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
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| TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.002939 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.431592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCTTTC TTTCGTTCAA GCGTTACAAC ATTCGTCTGG TATCCGCTCT GATTCTTATT
TTGTCAGGAC TGCGCTGCTT GGCCGACACG TCAACCCCGG ATTTCCGCCA GATGGCGCAA
CTTGCAGAGT ACGTGGGCGT TGATTATCCG GAAGCGGTGG CCAATGGTGA AATTATTAAT
GAGGGGGAAT ATCAGGAAAT GCTGGAGTTT TCCCGCATTC TGGTAACAGA GGCGCAACAA
GCCAAAGCTA CCACGATAAT TTCCAGAGCC CAAAAATTGG AAGCGGCCAT TCATGAAAAG
CAGACGCCGG AAGTCATTCG ACAATTGGGC AGAGAGTTGC GCAGTGAATT ATTGATGCTC
ATGCCTGTAT CATCTCAGCC CTCACAGCTC CTTCCAATCA GTGAGACTCA TTCCCTGTTT
CAAACACATT GTGCTGCCTG CCACGGAGCG ATGGGCAAAG GCGATGGTGT TGCAAGCGCA
GGACTCGAAC CGCCGCCAAC AGATTTTACT GATCGAGAAC GTGCAATGAA TCGCTCAGTA
CTTGGCCTTT ACGATGCGAT TACCGACGGA ATCAAGGAAA CGGCCATGGT CTCTTACGAT
CAGCTCAGCG AAGAGCAGCG TTGGTCCCTC GCATTTTATG TAGGTGGTCT CGCATTTGAA
GCAAACGCAG AAGAAGGAGT GAACGCTACC GACCTCTCCA TTAAAGAGCT GATTAATCAC
AACCCGATAC AGTTAGCGAA CGGAGATTCT AATACGCTAA AGAGTGTCAT TTACCTGCGC
GCACAACCGA GTGCTCTTTT TACGGAGAAG CCATCGCCCT TGCAAATTGC TCGCGATCAA
CTGTTGGCCG CACGCGCTTC ATACAACAAG GGAAACTATG AAGAATCCAA TCGACTGGCC
GTGAGTGCCT ATCTCGACGG GTTTGAGCTG GTAGAAAACA GCCTGGATAC ACGAAACCCC
GATCTCAGGA AAGACATCGA AGCCAATATG ATGGCGCTGA GAAAACAATT TCGGGAAAGT
TCAAACCAGG AACAACTCAA TACACTCCTC GATATTACTT TGGCCCAGCT GGAAACGGCA
AAACGACAAC TATCTGCAGA CAGTCTTTCT AACGCTACGC TGTTCAGCGC AAGTTTAATT
ATTTTATTAC GCGAAGGGTT GGAAGCCTTG CTTGTCACTC TGGCCCTTGT CTTGGTATTA
ATCCGCTCTG AACGACGCGA CGCGCTTAAA TTTGTCCACG CTGGCTGGAT TACGGCGCTC
ATTGCCGGTG GGGTAACCTG GTGGGCGGCA CGATCGCTCG TCAATATTAG CGGTGCCAGT
AGAGAGGTAA TGGAAGGTGT TGCCGCTTTA GCTGCGGCGT TGGTGCTATT TTATGTCGGC
GTTTGGATGC ACAGCAAATC CAATACCATA CAGTGGAAGG CGTACATTCA AAAACACGTT
ACTCAACGGT TAAAAACCGG AACATTGTGG GGAATAGCTA CACTCGCATT TGTCGCCGTG
TATCGAGAAG TTTTTGAAAC CGTGTTGTTC TACGAAGCGC TACTGACCCA ATCTTTACCA
GCTCAAAACC CAACGATTAT CGGGGGTTTC CTTGTTGGCT TACTCTGTTT AAGTATCATC
GGATGGATAA TGGTTCGTTA CTCAATAAAG CTTCCTATTG GACGGTTCTT TTCCGTAACC
ACGTACCTTC TTGTTGGCTT GTCCTTCGTA TTGATAGGAA AAGGGGTAAT AGCTCTGCAG
GAAGCGGCTT TCATTGACGC GTCCCCACTT CCGATATCAT TTGAGGTTGA CTGGATTGGC
TTAAAATCCA CATGGCAAAG CTTAATGGCC CAAATCACTA TACTGGTGTT ATTTTTGGTG
TTCATGCTGG TTTCTAATCA ACGACGAAAA CCAGAAACCA GTTCAGATTT TTAA
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| Protein sequence | MFFLSFKRYN IRLVSALILI LSGLRCLADT STPDFRQMAQ LAEYVGVDYP EAVANGEIIN
EGEYQEMLEF SRILVTEAQQ AKATTIISRA QKLEAAIHEK QTPEVIRQLG RELRSELLML
MPVSSQPSQL LPISETHSLF QTHCAACHGA MGKGDGVASA GLEPPPTDFT DRERAMNRSV
LGLYDAITDG IKETAMVSYD QLSEEQRWSL AFYVGGLAFE ANAEEGVNAT DLSIKELINH
NPIQLANGDS NTLKSVIYLR AQPSALFTEK PSPLQIARDQ LLAARASYNK GNYEESNRLA
VSAYLDGFEL VENSLDTRNP DLRKDIEANM MALRKQFRES SNQEQLNTLL DITLAQLETA
KRQLSADSLS NATLFSASLI ILLREGLEAL LVTLALVLVL IRSERRDALK FVHAGWITAL
IAGGVTWWAA RSLVNISGAS REVMEGVAAL AAALVLFYVG VWMHSKSNTI QWKAYIQKHV
TQRLKTGTLW GIATLAFVAV YREVFETVLF YEALLTQSLP AQNPTIIGGF LVGLLCLSII
GWIMVRYSIK LPIGRFFSVT TYLLVGLSFV LIGKGVIALQ EAAFIDASPL PISFEVDWIG
LKSTWQSLMA QITILVLFLV FMLVSNQRRK PETSSDF
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